RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TEX28O15482 410 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 RBM25P49756 843 aaKnown RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 AK2P54819 239 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 NRLP54845 237 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 STPG1Q5TH74 334 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 CYP26C1Q6V0L0 522 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 PLPPR4Q7Z2D5 763 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 IQCA1Q86XH1 822 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 SMARCC2Q8TAQ2 1214 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 OTUD7AQ8TE49 926 aaPredicted RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 PIBF1Q8WXW3 757 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 TNPO1Q92973 898 aaKnown RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 FAM227BQ96M60 508 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 ZSCAN10Q96SZ4 725 aaPredicted RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 LSM14BQ9BX40 385 aaKnown RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 NT5C3AQ9H0P0 336 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 MRPL17Q9NRX2 175 aaKnown RBP10.49□□□□□ -0.73
LSG1-202ENST00000427461 TBC1D13Q9NVG8 400 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
LSG1-202ENST00000427461 MTCL1Q9Y4B5 1905 aaKnown RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 MAST4O15021 2626 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 CHURC1-FNTBB4DL54 471 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 NCAM2O15394 837 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 CYTH3O43739 400 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 GLUD1P00367 558 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 HOXC13P31276 330 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 FNTBP49356 437 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 ACTR2P61160 394 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 NTHL1P78549 312 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 MTMR1Q13613 665 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 RSPO2Q6UXX9 243 aaPredicted RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 TAS1R1Q7RTX1 841 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 ZNF589Q86UQ0 364 aaPredicted RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 ZNF280BQ86YH2 543 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 PHKBQ93100 1093 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 NELL2Q99435 816 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 KXD1Q9BQD3 176 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 SMOC1Q9H4F8 434 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 HEBP1Q9NRV9 189 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 ZSWIM5Q9P217 1185 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 SLC9A2Q9UBY0 812 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 NDRG2Q9UN36 371 aaKnown RBP10.48□□□□□ -0.73
LSG1-202ENST00000427461 UBIAD1Q9Y5Z9 338 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 SDK1Q7Z5N4 2213 aa10.48□□□□□ -0.73
LSG1-202ENST00000427461 LAMA5O15230 3695 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 MEIS2O14770 477 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 AXIN1O15169 862 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 FSHRP23945 695 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 CLCN3P51790 818 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 NLRP11P59045 1033 aaKnown RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 SATB1Q01826 763 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 ADCY1Q08828 1119 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 C19orf48Q6RUI8 117 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 TRMT1LQ7Z2T5 733 aaKnown RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 PALB2Q86YC2 1186 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 METTL13Q8N6R0 699 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 C12orf50Q8NA57 414 aaPredicted RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 CDHR1Q96JP9 859 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 RPS6KC1Q96S38 1066 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 ARRDC1-AS1Q9H2J1 176 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
LSG1-202ENST00000427461 BPTFQ12830 3046 aa10.47□□□□□ -0.73
LSG1-202ENST00000427461 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 HBP1O60381 514 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 FOXD2O60548 495 aaPredicted RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 DDHD2O94830 711 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 C22orf31O95567 290 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 ADH1AP07327 375 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 NOVA1P51513 510 aaKnown RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 AFF1P51825 1210 aaKnown RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 PFKPQ01813 784 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 RNASELQ05823 741 aaKnown RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 ZNF852Q6ZMS4 543 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 GRASPQ7Z6J2 395 aaPredicted RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 GLYCTKQ8IVS8 523 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 ZNF687Q8N1G0 1237 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 BBC3Q96PG8 261 aaPredicted RBP10.46□□□□□ -0.73
LSG1-202ENST00000427461 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 CHRDQ9H2X0 955 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 JADE2Q9NQC1 790 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
LSG1-202ENST00000427461 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
LSG1-202ENST00000427461 TTC41PQ6P2S7 1318 aa10.45□□□□□ -0.74
LSG1-202ENST00000427461 GAS2O43903 313 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms