RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LONRF3Q496Y0 759 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 SPOUT1Q5T280 376 aaKnown RBP20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 MAEAQ7L5Y9 396 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 ERMNQ8TAM6 284 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 ADAMTS19Q8TE59 1207 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 POLR3FQ9H1D9 316 aaPredicted RBP20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 LRWD1Q9UFC0 647 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 PP2D1A8MPX8 630 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 H3BQV1 296 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 CSPG5O95196 566 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 MUTP22033 750 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 MBTD1Q05BQ5 628 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 CTC1Q2NKJ3 1217 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 RILPL1Q5EBL4 403 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 MRPL10Q7Z7H8 261 aaKnown RBP20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 PCDHB2Q9Y5E7 798 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 PCDHGC5Q9Y5F6 944 aa20.38■□□□□ 0.85
SMARCAL1-205ENST00000425815 RALGAPA2Q2PPJ7 1873 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 TSPAN1O60635 241 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 OFD1O75665 1012 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 FGF18O76093 207 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 CDC25AP30304 524 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 LTBRP36941 435 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 CCT6AP40227 531 aaKnown RBP20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 PBX3P40426 434 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 PRPHP41219 470 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 AGMOQ6ZNB7 445 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 ADGRD2Q7Z7M1 963 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 PABPC5Q96DU9 382 aaKnown RBP20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 NECAB3Q96P71 396 aaPredicted RBP20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 MMTAG2Q9BU76 263 aaKnown RBP20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 NFKBIZQ9BYH8 718 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 AAASQ9NRG9 546 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 KIAA1024Q9UPX6 916 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 MUC3AQ02505 3323 aa20.37■□□□□ 0.85
SMARCAL1-205ENST00000425815 LAD1O00515 517 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 SKIP12755 728 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 LAG3P18627 525 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 CYP11B2P19099 503 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 KCNA5P22460 613 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 AFF1P51825 1210 aaKnown RBP20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 ERVFC1P60507 584 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 ATP2C1P98194 919 aaPredicted RBP20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 PLCB3Q01970 1234 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 TFDP1Q14186 410 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 LEXMQ3ZCV2 418 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 PADI6Q6TGC4 694 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 KCNT2Q6UVM3 1135 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 LRRC43Q8N309 656 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 SMG8Q8ND04 991 aaKnown RBP20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 BSNDQ8WZ55 320 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 POLD4Q9HCU8 107 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 NLRC5Q86WI3 1866 aa20.36■□□□□ 0.85
SMARCAL1-205ENST00000425815 FNDC1Q4ZHG4 1894 aaPredicted RBP20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 RAB27AP51159 221 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 UBE3AQ05086 875 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 PCBP1Q15365 356 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 HAUS3Q68CZ6 603 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 DTHD1Q6ZMT9 781 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 THNSL1Q8IYQ7 743 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 MCPH1Q8NEM0 835 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 CPB2Q96IY4 423 aa20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 CCDC43Q96MW1 224 aaKnown RBP20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 UHRF1Q96T88 793 aaPredicted RBP20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 EIF2AQ9BY44 585 aaKnown RBP20.35■□□□□ 0.85
SMARCAL1-205ENST00000425815 CUL9Q8IWT3 2517 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 ARHGEF35A5YM69 484 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 H3BQ06 376 aaPredicted RBP20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 INO80B-WBP1J3KQ70 363 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 FSCN2O14926 492 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 LINC01565O15544 149 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 B4GALT5O43286 388 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 ARF4P18085 180 aaPredicted RBP20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 AXLP30530 894 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 DLX2Q07687 328 aaPredicted RBP20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 SNX29Q8TEQ0 813 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 BHMT2Q9H2M3 363 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 RNF39Q9H2S5 420 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 IGFLR1Q9H665 355 aa20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 DDX19AQ9NUU7 478 aaKnown RBP20.34■□□□□ 0.85
SMARCAL1-205ENST00000425815 E9PMD0 336 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 B4GALT3O60512 393 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 ADAM15Q13444 863 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 NOMO2Q5JPE7 1267 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 CDCA2Q69YH5 1023 aaPredicted RBP20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 KCNK18Q7Z418 384 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 SLC39A11Q8N1S5 342 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 MRPS27Q92552 414 aaKnown RBP20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 PGBD4Q96DM1 585 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 ZNF558Q96NG5 402 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 FZD8Q9H461 694 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 NRDE2Q9H7Z3 1164 aa20.33■□□□□ 0.85
SMARCAL1-205ENST00000425815 TBC1D13Q9NVG8 400 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms