RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF720Q7Z2F6 126 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC105Q8IYK2 499 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC197Q8NCU1 140 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 BANK1Q8NDB2 785 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 MGARPQ8TDB4 240 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CRYGNQ8WXF5 182 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 AGPAT1Q99943 283 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 POLR3CQ9BUI4 534 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CNOT10Q9H9A5 744 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 OLFML3Q9NRN5 406 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 INTS9Q9NV88 658 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC169A6NNP5 214 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 TISP43B9A030 160 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 KIAA0391O15091 583 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ATMINO43313 823 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 GAS7O60861 476 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 GCLMP48507 274 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 MAPK7Q13164 816 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 DRP2Q13474 957 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 PPP1R7Q15435 360 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 SNCBQ16143 134 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ERMARDQ5T6L9 678 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC174Q6PII3 467 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 C1orf186Q6ZWK4 172 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 UBL4BQ8N7F7 174 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 SEC14L1Q92503 715 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ACP6Q9NPH0 428 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ZDHHC18Q9NUE0 388 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 ZNF219Q9P2Y4 722 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 PI4KBQ9UBF8 816 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
SMARCC1-202ENST00000425518 MAST2Q6P0Q8 1798 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 OPLAHO14841 1288 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 BMP3P12645 472 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 RPL21P46778 160 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 DLG4P78352 724 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ABCB5Q2M3G0 1257 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 OTOP1Q7RTM1 612 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 LRRC34Q8IZ02 419 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 TLCD1Q96CP7 247 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 PRMT1Q99873 361 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 SH2D3AQ9BRG2 576 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 GPR88Q9GZN0 384 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 TTC7AQ9ULT0 858 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 FAM187AA6NFU0 413 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 TRIM37O94972 964 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 GH2P01242 217 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 COMTP21964 271 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 DDR1Q08345 913 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 PPP2R5EQ16537 467 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 FAM133BQ5BKY9 247 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 HIBCHQ6NVY1 386 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC137Q6PK04 289 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 STXBP4Q6ZWJ1 553 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 CPNE8Q86YQ8 564 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 SP8Q8IXZ3 490 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ANKS4BQ8N8V4 417 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 PRELID2Q8N945 189 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 KAT5Q92993 513 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 MKL1Q969V6 931 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 FAM129AQ9BZQ8 928 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 EPB41L4BQ9H329 900 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 GEMIN8Q9NWZ8 242 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 MTRF1LQ9UGC7 380 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ZMYM2Q9UBW7 1377 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 EMSYQ7Z589 1322 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 TCRBV7S2A1N4TA0A589 114 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ARHGEF35A5YM69 484 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 EIF3DO15371 548 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 SPOPO43791 374 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 BCRP11274 1271 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 LRRC14Q15048 493 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ZDHHC24Q6UX98 284 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 PNMA8AQ86V59 439 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 C3orf20Q8ND61 904 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 OLIG1Q8TAK6 271 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 MLXIPLQ9NP71 852 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 DNAJC17Q9NVM6 304 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 BAIAP2L1Q9UHR4 511 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 ZBTB21Q9ULJ3 1066 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 CD2APQ9Y5K6 639 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 STK24Q9Y6E0 443 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms