RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CD2BP2O95400 341 aaKnown RBP23.99■■□□□ 1.43
CDCP1-202ENST00000425231 OR52Z1P0C646 297 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 SKIP12755 728 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 IL9P15248 144 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 HOXA11P31270 313 aaPredicted RBP23.99■■□□□ 1.43
CDCP1-202ENST00000425231 TRAPPC10P48553 1259 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 PLCB3Q01970 1234 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 ADAM15Q13444 863 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 MXD4Q14582 209 aaPredicted RBP23.99■■□□□ 1.43
CDCP1-202ENST00000425231 PUS10Q3MIT2 529 aaKnown RBP23.99■■□□□ 1.43
CDCP1-202ENST00000425231 C4orf32Q8N8J7 132 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 LPPQ93052 612 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 TUFT1Q9NNX1 390 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 MEIS3P2A8K0S8 358 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 MED24O75448 989 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 PBX3P40426 434 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 ERVFC1P60507 584 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 GNL2Q13823 731 aaKnown RBP23.98■■□□□ 1.43
CDCP1-202ENST00000425231 PPP2R3CQ969Q6 453 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 TLR9Q9NR96 1032 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 LZTS1Q9Y250 596 aa23.98■■□□□ 1.43
CDCP1-202ENST00000425231 ARL2P36404 184 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 TOB1P50616 345 aaPredicted RBP23.97■■□□□ 1.43
CDCP1-202ENST00000425231 RAB27AP51159 221 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 PTENP60484 403 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 POU5F1BQ06416 359 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 NBR1Q14596 966 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 LONRF3Q496Y0 759 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 FAM178BQ8IXR5 827 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 MRPS27Q92552 414 aaKnown RBP23.97■■□□□ 1.43
CDCP1-202ENST00000425231 TMX3Q96JJ7 454 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 ZNF558Q96NG5 402 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 POLR3CQ9BUI4 534 aaPredicted RBP23.97■■□□□ 1.43
CDCP1-202ENST00000425231 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
CDCP1-202ENST00000425231 CD320Q9NPF0 282 aa23.97■■□□□ 1.43
CDCP1-202ENST00000425231 FSCN2O14926 492 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 TBX10O75333 385 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 UBXN11Q5T124 520 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 RBM23Q86U06 439 aaKnown RBP23.96■■□□□ 1.43
CDCP1-202ENST00000425231 IFNLR1Q8IU57 520 aaPredicted RBP23.96■■□□□ 1.43
CDCP1-202ENST00000425231 ASAP3Q8TDY4 903 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 MICAL1Q8TDZ2 1067 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 RSPH1Q8WYR4 309 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 MRPL9Q9BYD2 267 aaKnown RBP23.96■■□□□ 1.43
CDCP1-202ENST00000425231 NOL7Q9UMY1 257 aaKnown RBP23.96■■□□□ 1.43
CDCP1-202ENST00000425231 PCDHB2Q9Y5E7 798 aa23.96■■□□□ 1.43
CDCP1-202ENST00000425231 OFD1O75665 1012 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 RPA1P27694 616 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 NRIP1P48552 1158 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 CAPSQ13938 189 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 PDE12Q6L8Q7 609 aaKnown RBP23.95■■□□□ 1.42
CDCP1-202ENST00000425231 MRPL10Q7Z7H8 261 aaKnown RBP23.95■■□□□ 1.42
CDCP1-202ENST00000425231 EFHBQ8N7U6 833 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 TBC1D32Q96NH3 1257 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 SPG21Q9NZD8 308 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 DBR1Q9UK59 544 aaKnown RBP23.95■■□□□ 1.42
CDCP1-202ENST00000425231 C5orf42Q9H799 3197 aa23.95■■□□□ 1.42
CDCP1-202ENST00000425231 GLRA2P23416 452 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 PPM1AP35813 382 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 TFDP1Q14186 410 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 PCBP1Q15365 356 aaKnown RBP eCLIP23.94■■□□□ 1.42
CDCP1-202ENST00000425231 AGMOQ6ZNB7 445 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 SLC39A11Q8N1S5 342 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 CCDC43Q96MW1 224 aaKnown RBP23.94■■□□□ 1.42
CDCP1-202ENST00000425231 NACC1Q96RE7 527 aa23.94■■□□□ 1.42
CDCP1-202ENST00000425231 PUF60Q9UHX1 559 aaKnown RBP23.94■■□□□ 1.42
CDCP1-202ENST00000425231 USO1O60763 962 aaKnown RBP23.93■■□□□ 1.42
CDCP1-202ENST00000425231 FXR2P51116 673 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDCP1-202ENST00000425231 BCAR1P56945 870 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 POTEGQ6S5H5 508 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 GLB1LQ6UWU2 654 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 PGBD4Q96DM1 585 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 MSLNLQ96KJ4 702 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 NFKBIZQ9BYH8 718 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 TLE6Q9H808 572 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 CLEC1BQ9P126 229 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 PCDHB6Q9Y5E3 794 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 PER2O15055 1255 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 TSPAN1O60635 241 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 ERLIN2O94905 339 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 GLP2RO95838 553 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 KRT17Q04695 432 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 MBTD1Q05BQ5 628 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 PTGDRQ13258 359 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 CLUL1Q15846 466 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 AMHR2Q16671 573 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 NOMO2Q5JPE7 1267 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 ERMNQ8TAM6 284 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 KHSRPQ92945 711 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDCP1-202ENST00000425231 POLR3FQ9H1D9 316 aaPredicted RBP23.93■■□□□ 1.42
CDCP1-202ENST00000425231 GPRC5CQ9NQ84 441 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 TBC1D13Q9NVG8 400 aa23.93■■□□□ 1.42
CDCP1-202ENST00000425231 NT5C1B-RDH14C9J2C7 533 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 INO80B-WBP1J3KQ70 363 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 MBTPS2O43462 519 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 AXLP30530 894 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 ALDH7A1P49419 539 aaKnown RBP23.92■■□□□ 1.42
CDCP1-202ENST00000425231 NDUFV1P49821 464 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 MAEAQ7L5Y9 396 aa23.92■■□□□ 1.42
CDCP1-202ENST00000425231 TCF25Q9BQ70 676 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms