RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 HIPK4Q8NE63 616 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 CFAP61Q8NHU2 1237 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 RFFLQ8WZ73 363 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 HSPH1Q92598 858 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 MTRQ99707 1265 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 MSTO1Q9BUK6 570 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 NAGPAQ9UK23 515 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 PCDHAC2Q9Y5I4 1007 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 SIGLEC1Q9BZZ2 1709 aa10.98□□□□□ -0.65
VPS37A-202ENST00000425020 EAPPQ56P03 285 aaPredicted RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 ZFPM1Q8IX07 1006 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 NME8Q8N427 588 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 CASKIN2Q8WXE0 1202 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 THAP2Q9H0W7 228 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 ZHX2Q9Y6X8 837 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 AGLP35573 1532 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 A0A0G2JND7 137 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 DDTLA6NHG4 134 aaPredicted RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 TROVE2P10155 538 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 QARSP47897 775 aaKnown RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 USP11P51784 963 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 CENPPQ6IPU0 288 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 RHOT2Q8IXI1 618 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 DCAF4Q8WV16 495 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 IL17RAQ96F46 866 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 POP1Q99575 1024 aaKnown RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 SMYD2Q9NRG4 433 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 AFF2P51816 1311 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 SSU72P8A0A1W2PR75 194 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 I3L4J1 428 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 FOXN3O00409 490 aaPredicted RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 EIF3HO15372 352 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 GCKP35557 465 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 MUM1Q2TAK8 710 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 KLHDC7AQ5VTJ3 777 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 MMS22LQ6ZRQ5 1243 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 ZBTB8OSQ8IWT0 167 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 SCFD1Q8WVM8 642 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 MAIP1Q8WWC4 291 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 N4BP2L2Q92802 583 aaPredicted RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
VPS37A-202ENST00000425020 ACP6Q9NPH0 428 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 ALG6Q9Y672 507 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 IVNS1ABPQ9Y6Y0 642 aa10.97□□□□□ -0.65
VPS37A-202ENST00000425020 EYA4O95677 639 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 TNNC2P02585 160 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 ASNSP08243 561 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 MDH1P40925 334 aaKnown RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 IL9RQ01113 521 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 HADHQ16836 314 aaKnown RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 MCTP2Q6DN12 878 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 SNRNP48Q6IEG0 339 aaKnown RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 CROCCP2Q86T23 111 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 ATG4AQ8WYN0 398 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 TTC17Q96AE7 1141 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 HVCN1Q96D96 273 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 RTFDC1Q9BY42 306 aaPredicted RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 PITPNM3Q9BZ71 974 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 DDX4Q9NQI0 724 aaKnown RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 HEY1Q9Y5J3 304 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 PDXKO00764 312 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 INHBAP08476 426 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 CA8P35219 290 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 SOX10P56693 466 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 KYNUQ16719 465 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 NT5DC1Q5TFE4 455 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 ZNF571Q7Z3V5 609 aaPredicted RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 USP38Q8NB14 1042 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 TMEM143Q96AN5 459 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 PNMA5Q96PV4 448 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 PRMT1Q99873 361 aaKnown RBP10.96□□□□□ -0.65
VPS37A-202ENST00000425020 AGPAT1Q99943 283 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 FAM167BQ9BTA0 163 aa10.96□□□□□ -0.65
VPS37A-202ENST00000425020 MSH4O15457 936 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 STAMBPO95630 424 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 SLC29A2Q14542 456 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 TRADDQ15628 312 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 NAB2Q15742 525 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 OR6B2Q6IFH4 312 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 WDR59Q6PJI9 974 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 ANKMY2Q8IV38 441 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 KIF2BQ8N4N8 673 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 ZNF473Q8WTR7 871 aaKnown RBP10.96□□□□□ -0.66
VPS37A-202ENST00000425020 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.66
VPS37A-202ENST00000425020 FAM84AQ96KN4 292 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 RNF146Q9NTX7 359 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 AKT3Q9Y243 479 aa10.96□□□□□ -0.66
VPS37A-202ENST00000425020 PLS3P13797 630 aa10.95□□□□□ -0.66
VPS37A-202ENST00000425020 COMTP21964 271 aa10.95□□□□□ -0.66
VPS37A-202ENST00000425020 SCP2P22307 547 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms