RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 NR5A1Q13285 461 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 KRT31Q15323 416 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 CIAPIN1Q6FI81 312 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ACAD11Q709F0 780 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 KMT5AQ9NQR1 393 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 DENND3A2RUS2 1198 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 PRKAB2O43741 272 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 GAP43P17677 238 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 PPP2R2AP63151 447 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 GRIN1Q05586 938 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 PIGSQ96S52 555 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 BBS2Q9BXC9 721 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 PCIF1Q9H4Z3 704 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 SAMSN1Q9NSI8 373 aaKnown RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 SEMA3EO15041 775 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 GYS1P13807 737 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 COPB2P35606 906 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ADD2P35612 726 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 SLC16A2P36021 539 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 GPATCH4Q5T3I0 446 aaKnown RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 DNAAF3Q8N9W5 541 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 PARVGQ9HBI0 331 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 SOX13Q9UN79 622 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 S100A9P06702 114 aaKnown RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 RECQLP46063 649 aaPredicted RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 BTN2A2Q8WVV5 523 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 MTERF3Q96E29 417 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 RASA4BC9J798 803 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 MEIS1O00470 390 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 DNALI1O14645 258 aaPredicted RBP11.82□□□□□ -0.52
TNC-203ENST00000423613 RASA4O43374 803 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 CHEK2O96017 543 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 MYBL1P10243 752 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 ZBTB18Q99592 522 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 CCT7Q99832 543 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 XDHP47989 1333 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 TMEM2Q9UHN6 1383 aa11.82□□□□□ -0.52
TNC-203ENST00000423613 COPEO14579 308 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 TTLL1O95922 423 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 KRT1P04264 644 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 MECOMQ03112 1051 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 LCORLQ8N3X6 602 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 MRPL40Q9NQ50 206 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 SUN2Q9UH99 717 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 GFPT2O94808 682 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 CDC25AP30304 524 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PGM1P36871 562 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PATL1Q86TB9 770 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 BTBD6Q96KE9 485 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 TMEM245Q9H330 911 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 KPNA2P52292 529 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 NSUN2Q08J23 767 aaKnown RBP eCLIP11.81□□□□□ -0.52
TNC-203ENST00000423613 PI16Q6UXB8 463 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 KRT73Q86Y46 540 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 NDUFAF2Q8N183 169 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 TRIM11Q96F44 468 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 AP3B1O00203 1094 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 ZNF263O14978 683 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 LARGE1O95461 756 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PUS7LQ9H0K6 701 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 FAM95CA0A1B0GW59 222 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 M0R3G1 203 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 ARFIP2P53365 341 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 CATSPER1Q8NEC5 780 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 DNAJC9Q8WXX5 260 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 LZICQ8WZA0 190 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PBKQ96KB5 322 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 CEP170P1Q96L14 293 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 PRPF18Q99633 342 aaKnown RBP11.81□□□□□ -0.52
TNC-203ENST00000423613 SPTLC3Q9NUV7 552 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 STK17AQ9UEE5 414 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 RCOR1Q9UKL0 485 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 SUGT1Q9Y2Z0 365 aa11.81□□□□□ -0.52
TNC-203ENST00000423613 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
TNC-203ENST00000423613 GOLGA8SH3BPF8 625 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms