RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 FAM105AQ9NUU6 356 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
SPC24-201ENST00000423327 BDP1A6H8Y1 2624 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 LINC01565O15544 149 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 HOXA2O43364 376 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 FGF18O76093 207 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 EOMESO95936 686 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 RPA1P27694 616 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 PTENP60484 403 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 DLX2Q07687 328 aaPredicted RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 IL17AQ16552 155 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 AMHR2Q16671 573 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SPC24-201ENST00000423327 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 DBR1Q9UK59 544 aaKnown RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
SPC24-201ENST00000423327 FSCN2O14926 492 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 ASAP2O43150 1006 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 B4GALT3O60512 393 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 TSPAN1O60635 241 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 ZNF623O75123 536 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 TBX10O75333 385 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 XRCC6P12956 609 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPC24-201ENST00000423327 LAG3P18627 525 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 MBTD1Q05BQ5 628 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 PTGDRQ13258 359 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 BACH2Q9BYV9 841 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
SPC24-201ENST00000423327 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 TNFRSF10AO00220 468 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 IL9P15248 144 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 MCM2P49736 904 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 RAB27AP51159 221 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 AFF1P51825 1210 aaKnown RBP17.2■□□□□ 0.34
SPC24-201ENST00000423327 ERVFC1P60507 584 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
SPC24-201ENST00000423327 KCNT2Q6UVM3 1135 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 AGMOQ6ZNB7 445 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 THNSL1Q8IYQ7 743 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 ABI1Q8IZP0 508 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 AAASQ9NRG9 546 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 CLDND1Q9NY35 253 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
SPC24-201ENST00000423327 B4GALT5O43286 388 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 OFD1O75665 1012 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 GLP2RO95838 553 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 PLCB3Q01970 1234 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 UBE3AQ05086 875 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 CUL4AQ13619 759 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 TMEM173Q86WV6 379 aaPredicted RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 SMG8Q8ND04 991 aaKnown RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 NACC1Q96RE7 527 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 EIF2AQ9BY44 585 aaKnown RBP17.19■□□□□ 0.34
SPC24-201ENST00000423327 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 TLR9Q9NR96 1032 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
SPC24-201ENST00000423327 NT5C1B-RDH14C9J2C7 533 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 CDC25AP30304 524 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
SPC24-201ENST00000423327 ADAM15Q13444 863 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 HAUS3Q68CZ6 603 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 CDCA2Q69YH5 1023 aaPredicted RBP17.18■□□□□ 0.34
SPC24-201ENST00000423327 BCL7CQ8WUZ0 217 aaPredicted RBP17.18■□□□□ 0.34
SPC24-201ENST00000423327 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
SPC24-201ENST00000423327 ZNF558Q96NG5 402 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
SPC24-201ENST00000423327 IGFLR1Q9H665 355 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 NRDE2Q9H7Z3 1164 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 CD320Q9NPF0 282 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 SMC3Q9UQE7 1217 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 LZTS1Q9Y250 596 aa17.18■□□□□ 0.34
SPC24-201ENST00000423327 C5orf42Q9H799 3197 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 TTLL13PA6NNM8 815 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 EDN1P05305 212 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 ARF4P18085 180 aaPredicted RBP17.17■□□□□ 0.34
SPC24-201ENST00000423327 MUTP22033 750 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 PRPHP41219 470 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 NRIP1P48552 1158 aa17.17■□□□□ 0.34
SPC24-201ENST00000423327 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
SPC24-201ENST00000423327 ATP2C1P98194 919 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms