RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ST3GAL5Q9UNP4 418 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 SQORQ9Y6N5 450 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 WDR81Q562E7 1941 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 MYH15Q9Y2K3 1946 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 GBF1Q92538 1859 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
PDGFC-202ENST00000422544 CCDC169A6NNP5 214 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 GPR182O15218 404 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 ACTN4O43707 911 aaKnown RBP10.25□□□□□ -0.77
PDGFC-202ENST00000422544 FAM13AO94988 1023 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 ZNF202O95125 648 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 SLFN14P0C7P3 912 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PLS3P13797 630 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 NAMPTP43490 491 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 AFMP43652 599 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PHKA2P46019 1235 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 NPTX2P47972 431 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PTENP60484 403 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 AMPD3Q01432 767 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 POU5F1BQ06416 359 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PAK2Q13177 524 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 CNKSR3Q6P9H4 555 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
PDGFC-202ENST00000422544 SRGAP1Q7Z6B7 1085 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 GRAMD1CQ8IYS0 662 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 CEP57L1Q8IYX8 460 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 MYCT1Q8N699 235 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 DEPTORQ8TB45 409 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 PAGE5Q96GU1 130 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 KIFC3Q9BVG8 833 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
PDGFC-202ENST00000422544 TNMDQ9H2S6 317 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 TMX1Q9H3N1 280 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 ERVK-5Q9HDB9 667 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 USP25Q9UHP3 1055 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
PDGFC-202ENST00000422544 EVPLQ92817 2033 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 INO80B-WBP1J3KQ70 363 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 SLC16A4O15374 487 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 TBCAO75347 108 aaKnown RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 ACTN1P12814 892 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 LIG1P18858 919 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 CASP1P29466 404 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 MBTD1Q05BQ5 628 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 DMP1Q13316 513 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 IKBKEQ14164 716 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 PPP2R5AQ15172 486 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 ODR4Q5SWX8 454 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 CATSPER4Q7RTX7 472 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 RTN4RL1Q86UN2 441 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 CNNM3Q8NE01 707 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 ENGASEQ8NFI3 743 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 HERVK_113Q902F9 699 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 APBB2Q92870 758 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 DNAJC19Q96DA6 116 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 NFKBIZQ9BYH8 718 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 LRRC27Q9C0I9 530 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 BLZF1Q9H2G9 400 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 TTYH1Q9H313 450 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 C17orf75Q9HAS0 396 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 MAGEF1Q9HAY2 307 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-202ENST00000422544 ODF2LQ9ULJ1 636 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 TCHHQ07283 1943 aa10.24□□□□□ -0.77
PDGFC-202ENST00000422544 ABHD14A-ACY1A0A1B0GW23 586 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 ENPP3O14638 875 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 MGEA5O60502 916 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 NR1I2O75469 434 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 IDEP14735 1019 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 SFPQP23246 707 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 ZNF131P52739 623 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 UBE2HP62256 183 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 FAM160A1Q05DH4 1040 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 CUL4BQ13620 913 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 CDCA2Q69YH5 1023 aaPredicted RBP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 KRBA2Q6ZNG9 492 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 ZBTB8OSQ8IWT0 167 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 SPIRE2Q8WWL2 714 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 RNPC3Q96LT9 517 aaKnown RBP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 C7orf25Q9BPX7 421 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 NTPCRQ9BSD7 190 aaKnown RBP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 TRIM9Q9C026 710 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 C2orf40Q9H1Z8 148 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 PARVGQ9HBI0 331 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 PANK4Q9NVE7 773 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 LARSQ9P2J5 1176 aaKnown RBP10.23□□□□□ -0.77
PDGFC-202ENST00000422544 KCNG1Q9UIX4 513 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 USP20Q9Y2K6 914 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
PDGFC-202ENST00000422544 TRIOO75962 3097 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 K7ERI5 159 aa10.22□□□□□ -0.77
PDGFC-202ENST00000422544 B4GALT5O43286 388 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms