RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KIF2CQ99661 725 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 SH2D3AQ9BRG2 576 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 C1QTNF1Q9BXJ1 281 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 IFT122Q9HBG6 1241 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 FAM105AQ9NUU6 356 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 CLDND1Q9NY35 253 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 SPG21Q9NZD8 308 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 KCNG1Q9UIX4 513 aa9.62□□□□□ -0.87
MDC1-204ENST00000422266 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
MDC1-204ENST00000422266 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 NCOR1O75376 2440 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TMEM150BA6NC51 233 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 GRXCR2A6NFK2 248 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 H3BQV1 296 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 NR1I2O75469 434 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TECP42680 631 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 NDUFV1P49821 464 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
MDC1-204ENST00000422266 PTENP60484 403 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 PPP2R5AQ15172 486 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 CTC1Q2NKJ3 1217 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 EFHBQ8N7U6 833 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TMEM87AQ8NBN3 555 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TMEM169Q96HH4 297 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 TRIM6Q9C030 488 aaPredicted RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 C2orf40Q9H1Z8 148 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 CWH43Q9H720 699 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 TLE6Q9H808 572 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 WRAP73Q9P2S5 460 aaPredicted RBP9.61□□□□□ -0.87
MDC1-204ENST00000422266 TTC28Q96AY4 2481 aa9.61□□□□□ -0.87
MDC1-204ENST00000422266 POTEMA6NI47 508 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 BMP15O95972 392 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 FGFR4P22455 802 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 PRPHP41219 470 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 ST3GAL1Q11201 340 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 HYAL1Q12794 435 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 ADAM15Q13444 863 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 SMAD4Q13485 552 aaKnown RBP9.6□□□□□ -0.87
MDC1-204ENST00000422266 ZNF174Q15697 407 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 NOMO2Q5JPE7 1267 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 KRT79Q5XKE5 535 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 APBB1IPQ7Z5R6 666 aaPredicted RBP9.6□□□□□ -0.87
MDC1-204ENST00000422266 CATSPER3Q86XQ3 398 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 ZBTB8OSQ8IWT0 167 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.6□□□□□ -0.87
MDC1-204ENST00000422266 ENTPD7Q9NQZ7 604 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 LRWD1Q9UFC0 647 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 SMC3Q9UQE7 1217 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 PCDHB2Q9Y5E7 798 aa9.6□□□□□ -0.87
MDC1-204ENST00000422266 FNDC1Q4ZHG4 1894 aaPredicted RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 ARHGEF35A5YM69 484 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 CSDE1O75534 798 aaKnown RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 ALADP13716 330 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 HOXB8P17481 243 aaPredicted RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 ATF7P17544 494 aaPredicted RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 NCLP19338 710 aaKnown RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 PDCP20941 246 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 ARL2P36404 184 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 GATMP50440 423 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 CAMK1Q14012 370 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 SMC1AQ14683 1233 aaKnown RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 CLLU1OSQ5K130 101 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 DTHD1Q6ZMT9 781 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TMC7Q7Z402 723 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 MRPL10Q7Z7H8 261 aaKnown RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 PIGOQ8TEQ8 1089 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TMX3Q96JJ7 454 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 IFT74Q96LB3 600 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TCF25Q9BQ70 676 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 ADPGKQ9BRR6 497 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TMEM175Q9BSA9 504 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TIPINQ9BVW5 301 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 NT5C3AQ9H0P0 336 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 CSRNP2Q9H175 543 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 TMEM60Q9H2L4 133 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 IGFLR1Q9H665 355 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 RSAD1Q9HA92 442 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 PRMT7Q9NVM4 692 aaPredicted RBP9.59□□□□□ -0.87
MDC1-204ENST00000422266 CD207Q9UJ71 328 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 DNM3Q9UQ16 869 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 SSX2IPQ9Y2D8 614 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 GIT1Q9Y2X7 761 aa9.59□□□□□ -0.87
MDC1-204ENST00000422266 ZMYM2Q9UBW7 1377 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms