RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 ANO5Q75V66 913 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 ANKRD35Q8N283 1001 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 SLC20A1Q8WUM9 679 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 TOPORSQ9NS56 1045 aaPredicted RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
DDX56-203ENST00000421223 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
DDX56-203ENST00000421223 HARSP12081 509 aaKnown RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 HLTFQ14527 1009 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX56-203ENST00000421223 TRADDQ15628 312 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 DNAJC21Q5F1R6 531 aaKnown RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 ARHGEF19Q8IW93 802 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 LNX1Q8TBB1 728 aaPredicted RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 ACBD3Q9H3P7 528 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 TMEM206Q9H813 350 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 KCND2Q9NZV8 630 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 CALCAP01258 141 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 TUBBP07437 444 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 DMP1Q13316 513 aaPredicted RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 MEI1Q5TIA1 1274 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 CTNNBL1Q8WYA6 563 aaPredicted RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.88□□□□□ -0.51
DDX56-203ENST00000421223 NFU1Q9UMS0 254 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 RPTORQ8N122 1335 aa11.88□□□□□ -0.51
DDX56-203ENST00000421223 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 GLI1P08151 1106 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 NPTX2P47972 431 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 FSTL1Q12841 308 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 PHLDB2Q86SQ0 1253 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 NSUN6Q8TEA1 469 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 MOV10L1Q9BXT6 1211 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 MYH11P35749 1972 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 ZNF862O60290 1169 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 CNGA1P29973 690 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 GGCXP38435 758 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 MXI1P50539 228 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 KRT76Q01546 638 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 INTS8Q75QN2 995 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 VSIG10LQ86VR7 867 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 SLC35G2Q8TBE7 412 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 BSNDQ8WZ55 320 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 MKNK1Q9BUB5 465 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
DDX56-203ENST00000421223 STIM2Q9P246 746 aa11.87□□□□□ -0.51
DDX56-203ENST00000421223 KIF4AO95239 1232 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ADRB2P07550 413 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 JAK3P52333 1124 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 JAM2P57087 298 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ZNF211Q13398 564 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 IFI16Q16666 785 aaKnown RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 MMGT1Q8N4V1 131 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TMEM143Q96AN5 459 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 PI4K2AQ9BTU6 479 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TRIM31Q9BZY9 425 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 THAP2Q9H0W7 228 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 PRLRP16471 622 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 COPB2P35606 906 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 GADL1Q6ZQY3 521 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 C4orf19Q8IY42 314 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ARHGEF26Q96DR7 871 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 DDX47Q9H0S4 455 aaKnown RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 RABEP2Q9H5N1 569 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 CTTNBP2NLQ9P2B4 639 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 TARSL2A2RTX5 802 aaKnown RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 CYP26A1O43174 497 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 RNF40O75150 1001 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 PPP1R37O75864 691 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
DDX56-203ENST00000421223 KRT5P13647 590 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 MUTP22033 750 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 DSG3P32926 999 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 PPP2R5AQ15172 486 aa11.86□□□□□ -0.51
DDX56-203ENST00000421223 EPC2Q52LR7 807 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms