RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 N4BP1O75113 896 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 STBD1O95210 358 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 DLATP10515 647 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 VAMP7P51809 220 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 PRKCEQ02156 737 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SEZ6Q53EL9 994 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SCARA3Q6AZY7 606 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SLC39A4Q6P5W5 647 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 STXBP4Q6ZWJ1 553 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 LNX1Q8TBB1 728 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 NEK9Q8TD19 979 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SLC20A1Q8WUM9 679 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 DCPSQ96C86 337 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 C12orf42Q96LP6 360 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 ACCSQ96QU6 501 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 LRRC1Q9BTT6 524 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 OSGEPQ9NPF4 335 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 XPNPEP1Q9NQW7 623 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SLC9A2Q9UBY0 812 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 DMGDHQ9UI17 866 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 GRID2IPA4D2P6 1211 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 PJA2O43164 708 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 JAK3P52333 1124 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 DRP2Q13474 957 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 NAB2Q15742 525 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 Q3C1V9 767 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 BEND6Q5SZJ8 279 aaPredicted RBP9.57□□□□□ -0.88
SNCA-206ENST00000420646 LMO3Q8TAP4 145 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 KMT5AQ9NQR1 393 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 TBX20Q9UMR3 447 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 ZSCAN5CA6NGD5 496 aaPredicted RBP9.57□□□□□ -0.88
SNCA-206ENST00000420646 MUTP22033 750 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 MARK3P27448 753 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 HOXA7P31268 230 aaPredicted RBP9.57□□□□□ -0.88
SNCA-206ENST00000420646 GTF2BQ00403 316 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 LY6KQ17RY6 165 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 TAF3Q5VWG9 929 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 C9orf131Q5VYM1 1079 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 XXYLT1Q8NBI6 393 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 SEMA4DQ92854 862 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 ALS2CR12Q96Q35 445 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 PI4K2AQ9BTU6 479 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
SNCA-206ENST00000420646 CSADQ9Y600 493 aa9.57□□□□□ -0.88
SNCA-206ENST00000420646 IGSF9BQ9UPX0 1349 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 KIAA1217Q5T5P2 1943 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 KRT13P13646 458 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 SFNP31947 248 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 WNT7BP56706 349 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 DMP1Q13316 513 aaPredicted RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 SNRNP35Q16560 246 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 MSANTD4Q8NCY6 345 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 SPATA4Q8NEY3 305 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 OLIG1Q8TAK6 271 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 GPRASP2Q96D09 838 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 ZBTB45Q96K62 511 aaPredicted RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 RBM12Q9NTZ6 932 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 FAM53CQ9NYF3 392 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 MAP3K20Q9NYL2 800 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 APEX2Q9UBZ4 518 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 DOCK1Q14185 1865 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 HTTP42858 3142 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 HNRNPDLO14979 420 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 PHACTR2O75167 634 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 LYPLA2O95372 231 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 SOX5P35711 763 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 STAT1P42224 750 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TRADDQ15628 312 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 ABHD15Q6UXT9 468 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 LBX2Q6XYB7 198 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TAS1R3Q7RTX0 852 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 POMGNT1Q8WZA1 660 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TMEM117Q9H0C3 514 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 ZNF408Q9H9D4 720 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 ESYT3A0FGR9 886 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 ANO9A1A5B4 782 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 CCDC151A5D8V7 595 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TTLL13PA6NNM8 815 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 SPATA31C2B4DYI2 1134 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 GALCP54803 685 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 STXBP2Q15833 593 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 CCDC181Q5TID7 509 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TEX2Q8IWB9 1127 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 PPM1KQ8N3J5 372 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 DHX38Q92620 1227 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 BICD1Q96G01 975 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 FAM213AQ9BRX8 229 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 MKNK1Q9BUB5 465 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 TMEM206Q9H813 350 aa9.56□□□□□ -0.88
SNCA-206ENST00000420646 ADARB2Q9NS39 739 aaKnown RBP9.56□□□□□ -0.88
SNCA-206ENST00000420646 PHIPQ8WWQ0 1821 aa9.55□□□□□ -0.88
SNCA-206ENST00000420646 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
SNCA-206ENST00000420646 H3BQF6 201 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms