RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 KSR1Q8IVT5 923 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 MTRQ99707 1265 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 TTC12Q9H892 705 aaPredicted RBP23.81■■□□□ 1.4
PTPN4-202ENST00000420482 FAM105AQ9NUU6 356 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 RGL1Q9NZL6 768 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 HCSTQ9UBK5 93 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 FAM205CA6NFA0 338 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 PRR33A8MZF0 331 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 SRGAP2CP0DJJ0 459 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 NCBP1Q09161 790 aaKnown RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 COASYQ13057 564 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 CTTNQ14247 550 aaKnown RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 MXD4Q14582 209 aaPredicted RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 PCBP1Q15365 356 aaKnown RBP eCLIP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 TMEM143Q96AN5 459 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 MSLNLQ96KJ4 702 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 TCF25Q9BQ70 676 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 EIF2AK1Q9BQI3 630 aaKnown RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 LLPHQ9BRT6 129 aaKnown RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 IFT122Q9HBG6 1241 aa23.8■■□□□ 1.4
PTPN4-202ENST00000420482 WRAP73Q9P2S5 460 aaPredicted RBP23.8■■□□□ 1.4
PTPN4-202ENST00000420482 ZNF623O75123 536 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 EYA4O95677 639 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 TXKP42681 527 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 FOSBP53539 338 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 ERVFC1P60507 584 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 LAMTOR4Q0VGL1 99 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 TFDP1Q14186 410 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 DUSP6Q16828 381 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 PLPP4Q5VZY2 271 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 TMC7Q7Z402 723 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 TMEM169Q96HH4 297 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 ZSCAN31Q96LW9 406 aaPredicted RBP23.79■■□□□ 1.4
PTPN4-202ENST00000420482 AGPAT5Q9NUQ2 364 aa23.79■■□□□ 1.4
PTPN4-202ENST00000420482 PIEZO1Q92508 2521 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 FSCN2O14926 492 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 ERLIN2O94905 339 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 SLITRK3O94933 977 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 LYPLA2O95372 231 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 ATF7P17544 494 aaPredicted RBP23.78■■□□□ 1.4
PTPN4-202ENST00000420482 RNASELQ05823 741 aaKnown RBP23.78■■□□□ 1.4
PTPN4-202ENST00000420482 ZNF579Q8NAF0 562 aaKnown RBP23.78■■□□□ 1.4
PTPN4-202ENST00000420482 RNF149Q8NC42 400 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 SMRP1Q8NCR6 262 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 URGCPQ8TCY9 931 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 C8orf76Q96K31 380 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 ANKEF1Q9NU02 776 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 CLEC1BQ9P126 229 aa23.78■■□□□ 1.4
PTPN4-202ENST00000420482 C19orf67A6NJJ6 358 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 PER2O15055 1255 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 DCXO43602 365 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 DGAT1O75907 488 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 SEC24BO95487 1268 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 HMGN5P82970 282 aaKnown RBP23.77■■□□□ 1.4
PTPN4-202ENST00000420482 GNL2Q13823 731 aaKnown RBP23.77■■□□□ 1.4
PTPN4-202ENST00000420482 SMC1AQ14683 1233 aaKnown RBP23.77■■□□□ 1.4
PTPN4-202ENST00000420482 NOMO2Q5JPE7 1267 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 FERMT3Q86UX7 667 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 SLC39A11Q8N1S5 342 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 TMEM87AQ8NBN3 555 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 HSD17B14Q9BPX1 270 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 BMP2KQ9NSY1 1161 aaPredicted RBP23.77■■□□□ 1.4
PTPN4-202ENST00000420482 BARX2Q9UMQ3 279 aaPredicted RBP23.77■■□□□ 1.4
PTPN4-202ENST00000420482 PCDHGC5Q9Y5F6 944 aa23.77■■□□□ 1.4
PTPN4-202ENST00000420482 ZC3H11AO75152 810 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPN4-202ENST00000420482 PBX3P40426 434 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 BCAR1P56945 870 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 ORC2Q13416 577 aaPredicted RBP23.76■■□□□ 1.39
PTPN4-202ENST00000420482 CCDC83Q8IWF9 413 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 FAM184AQ8NB25 1140 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 CNNM3Q8NE01 707 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 SH2B1Q9NRF2 756 aaPredicted RBP23.76■■□□□ 1.39
PTPN4-202ENST00000420482 STK39Q9UEW8 545 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 PCDHB2Q9Y5E7 798 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 C5orf42Q9H799 3197 aa23.76■■□□□ 1.39
PTPN4-202ENST00000420482 ZNF318Q5VUA4 2279 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 XRCC6P12956 609 aaKnown RBP eCLIP23.75■■□□□ 1.39
PTPN4-202ENST00000420482 AXLP30530 894 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 LPPQ93052 612 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 MTMR9Q96QG7 549 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 UBN1Q9NPG3 1134 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 KANSL3Q9P2N6 904 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 INPP5FQ9Y2H2 1132 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 CNTNAP2Q9UHC6 1331 aa23.75■■□□□ 1.39
PTPN4-202ENST00000420482 GLP2RO95838 553 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 ATP2B1P20020 1258 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 MCM7P33993 719 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 CA8P35219 290 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 POU5F1BQ06416 359 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 GIT2Q14161 759 aa23.74■■□□□ 1.39
PTPN4-202ENST00000420482 FAM193BQ96PV7 902 aaPredicted RBP23.74■■□□□ 1.39
PTPN4-202ENST00000420482 FOXP1Q9H334 677 aaPredicted RBP23.74■■□□□ 1.39
PTPN4-202ENST00000420482 ARID2Q68CP9 1835 aa23.73■■□□□ 1.39
PTPN4-202ENST00000420482 ZBTB39O15060 712 aa23.73■■□□□ 1.39
PTPN4-202ENST00000420482 HOXB8P17481 243 aaPredicted RBP23.73■■□□□ 1.39
PTPN4-202ENST00000420482 RBM25P49756 843 aaKnown RBP23.73■■□□□ 1.39
PTPN4-202ENST00000420482 GUCY1B3Q02153 619 aa23.73■■□□□ 1.39
PTPN4-202ENST00000420482 LONRF3Q496Y0 759 aa23.73■■□□□ 1.39
PTPN4-202ENST00000420482 TMEM184AQ6ZMB5 413 aa23.73■■□□□ 1.39
PTPN4-202ENST00000420482 HACE1Q8IYU2 909 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms