RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 MAP4K3Q8IVH8 894 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 CDAN1Q8IWY9 1227 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 KAT5Q92993 513 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 UNKQ9C0B0 810 aaKnown RBP5.93□□□□□ -1.46
VPS13A-207ENST00000419472 PRKRIP1Q9H875 184 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-207ENST00000419472 STARD7Q9NQZ5 370 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 CLDND1Q9NY35 253 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 LRFN1Q9P244 771 aa5.93□□□□□ -1.46
VPS13A-207ENST00000419472 UHRF1BP1Q6BDS2 1440 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 SETD5Q9C0A6 1442 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 BAIAP3O94812 1187 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 TBX18O95935 607 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 FPR2P25090 351 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 CD40P25942 277 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 MAP2K6P52564 334 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 ITGA8P53708 1063 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 IL10RAQ13651 578 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 TAF12Q16514 161 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 KSR1Q8IVT5 923 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 OR10H5Q8NGA6 315 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 DPF2Q92785 391 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 RILPL2Q969X0 211 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 APIPQ96GX9 242 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 GMCL1Q96IK5 515 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 DAGLAQ9Y4D2 1042 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 MED1Q15648 1581 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 PTPRKQ15262 1439 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 LMTK2Q8IWU2 1503 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 MROH1Q8NDA8 1641 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 LRRC14BA6NHZ5 514 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 K7ENM7 598 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 TRIM38O00635 465 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 DTNBO60941 627 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 GSNP06396 782 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 ANP32AP39687 249 aaKnown RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 HSPA7P48741 367 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 LAPTM5Q13571 262 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 PRKG1Q13976 671 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 TRIM25Q14258 630 aaKnown RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 SNX17Q15036 470 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 MPEG1Q2M385 716 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 RBM12BQ8IXT5 1001 aaKnown RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 C12orf50Q8NA57 414 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 TMEM41AQ96HV5 264 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 CHCHD6Q9BRQ6 235 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 HDAC8Q9BY41 377 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 STXBP5LQ9Y2K9 1186 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 PZPP20742 1482 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 KDM5AP29375 1690 aaKnown RBP5.92□□□□□ -1.46
VPS13A-207ENST00000419472 ABCC5O15440 1437 aa5.92□□□□□ -1.46
VPS13A-207ENST00000419472 FFAR2O15552 330 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GSTM1P09488 218 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GNAT1P11488 350 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GLULP15104 373 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 RAB6AP20340 208 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 ETV3P41162 512 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 DUSP4Q13115 394 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 PFKFB4Q16877 469 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 TIGD6Q17RP2 521 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
VPS13A-207ENST00000419472 CIAPIN1Q6FI81 312 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 PGBD2Q6P3X8 592 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GALNT5Q7Z7M9 940 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 SSH1Q8WYL5 1049 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 USP13Q92995 863 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-207ENST00000419472 ZSCAN31Q96LW9 406 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-207ENST00000419472 TBC1D22BQ9NU19 505 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 CAMSAP1Q5T5Y3 1602 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 VWDEQ8N2E2 1590 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 PRSS38A1L453 326 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 ACKR2O00590 384 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 AREL1O15033 823 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GAS6Q14393 721 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 PRR16Q569H4 304 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 RTP2Q5QGT7 225 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 TSHZ3Q63HK5 1081 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 UNQ6494/PRO21346Q6UXR6 183 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GOLGA6L1Q8N7Z2 621 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 C16orf92Q96LL3 132 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 GSX1Q9H4S2 264 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-207ENST00000419472 CNTD2Q9H8S5 307 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 B3GALT1Q9Y5Z6 326 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 PLA2R1Q13018 1463 aa5.91□□□□□ -1.46
VPS13A-207ENST00000419472 ANKRD30AQ9BXX3 1397 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 ABCC3O15438 1527 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 INMTO95050 263 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 PAMP19021 973 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 ALAS2P22557 587 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 LGALS4P56470 323 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 PRKG2Q13237 762 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 LSAMPQ13449 338 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 GPR19Q15760 415 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 SLC35G1Q2M3R5 365 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 CCDC157Q569K6 752 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms