RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GRIN3AQ8TCU5 1115 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 PIBF1Q8WXW3 757 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 RHOVQ96L33 236 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 JAKMIP1Q96N16 626 aaKnown RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TAAR1Q96RJ0 339 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 MPHOSPH6Q99547 160 aaKnown RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 LZTS2Q9BRK4 669 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SPC25Q9HBM1 224 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 CBX8Q9HC52 389 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 OSGEPQ9NPF4 335 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 ATP11BQ9Y2G3 1177 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 INPP5FQ9Y2H2 1132 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SNX14Q9Y5W7 946 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 ASGR1P07306 291 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 CPA1P15085 419 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 SMARCA1P28370 1054 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 HOXA13P31271 388 aaPredicted RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 EIF4A3P38919 411 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 RPS26P62854 115 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 BEX3Q00994 111 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 CAMK2GQ13555 558 aaPredicted RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 KCNA10Q16322 511 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 FSCN1Q16658 493 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 DUSP28Q4G0W2 176 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 HABP4Q5JVS0 413 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 IQSEC1Q6DN90 963 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 APOA5Q6Q788 366 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 SRBD1Q8N5C6 995 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 FANCBQ8NB91 859 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 PCSK9Q8NBP7 692 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 NSUN6Q8TEA1 469 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 SCFD2Q8WU76 684 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 RRP36Q96EU6 259 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 RMDN3Q96TC7 470 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 SPON2Q9BUD6 331 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 WDR11Q9BZH6 1224 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 MAP3K20Q9NYL2 800 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 SEC63Q9UGP8 760 aaKnown RBP7.97□□□□□ -1.13
HMGN1-205ENST00000419378 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
HMGN1-205ENST00000419378 KLF18A0A0U1RQI7 1052 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 B4DLN1 442 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-205ENST00000419378 TM4SF5O14894 197 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 DYNC1LI2O43237 492 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-205ENST00000419378 ZBTB43O43298 467 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 WIPF1O43516 503 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-205ENST00000419378 ARIH2O95376 493 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 POLR2MP0CAP2 368 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 MAGEA10P43363 369 aaPredicted RBP7.96□□□□□ -1.14
HMGN1-205ENST00000419378 MRPL12P52815 198 aaKnown RBP7.96□□□□□ -1.14
HMGN1-205ENST00000419378 LMNB2Q03252 620 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 TLE2Q04725 743 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 PAK2Q13177 524 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 PPP2R5BQ15173 497 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 ARHGEF16Q5VV41 709 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 FBXL19Q6PCT2 694 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 BLOC1S2Q6QNY1 142 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 CXCL17Q6UXB2 119 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 LINC00114Q6XXX2 140 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 SYNE3Q6ZMZ3 975 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 Q6ZUG5 572 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 TRIM11Q96F44 468 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 GLT1D1Q96MS3 346 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 IWS1Q96ST2 819 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 GDF15Q99988 308 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 AP5M1Q9H0R1 490 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 PDLIM7Q9NR12 457 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 PXMP2Q9NR77 195 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 CYP8B1Q9UNU6 501 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 Q9Y3F1 56 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
HMGN1-205ENST00000419378 A0A0U1RQG5 324 aaPredicted RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 GOLGA8AA7E2F4 631 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 GOLGA8BA8MQT2 603 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 NKRFO15226 690 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 DDX3YO15523 660 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PQBP1O60828 265 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 ECEL1O95672 775 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 CYP11A1P05108 521 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 TXNP10599 105 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 CASTP20810 708 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 GARTP22102 1010 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 RPS6KB1P23443 525 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PSMA5P28066 241 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 RCAN1P53805 252 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 NLRP12P59046 1061 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 LRRC14Q15048 493 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 STXBP2Q15833 593 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 SNAP47Q5SQN1 464 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms