RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 IRX6P78412 446 aaPredicted RBP11.28□□□□□ -0.6
MDC1-202ENST00000416571 UGCGQ16739 394 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 NOMO2Q5JPE7 1267 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 KANK3Q6NY19 840 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 MIER3Q7Z3K6 550 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
MDC1-202ENST00000416571 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 LENG9Q96B70 501 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 FDXACB1Q9BRP7 624 aaPredicted RBP11.28□□□□□ -0.6
MDC1-202ENST00000416571 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 FAM105AQ9NUU6 356 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 MYO15AQ9UKN7 3530 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 ADAMTS3O15072 1205 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.61
MDC1-202ENST00000416571 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
MDC1-202ENST00000416571 GALTP07902 379 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 AOC1P19801 751 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 DRP2Q13474 957 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 TDGQ13569 410 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 SLC22A17Q8WUG5 538 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 SLC5A5Q92911 643 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
MDC1-202ENST00000416571 RTP3Q9BQQ7 232 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 JPH2Q9BR39 696 aaPredicted RBP11.27□□□□□ -0.61
MDC1-202ENST00000416571 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 UNC45AQ9H3U1 944 aa11.27□□□□□ -0.61
MDC1-202ENST00000416571 SUCLA2Q9P2R7 463 aaPredicted RBP11.27□□□□□ -0.61
MDC1-202ENST00000416571 TPRP12270 2363 aaKnown RBP11.27□□□□□ -0.61
MDC1-202ENST00000416571 STK25O00506 426 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 SLC11A1P49279 550 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 USP11P51784 963 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 TARBP2Q15633 366 aaKnown RBP11.26□□□□□ -0.61
MDC1-202ENST00000416571 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 CWF19L1Q69YN2 538 aaKnown RBP11.26□□□□□ -0.61
MDC1-202ENST00000416571 Q6ZUG5 572 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 ADSSL1Q8N142 457 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 BRF1Q92994 677 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 PHKBQ93100 1093 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 SH2D3AQ9BRG2 576 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 NIFKQ9BYG3 293 aaKnown RBP11.26□□□□□ -0.61
MDC1-202ENST00000416571 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 MRPL17Q9NRX2 175 aaKnown RBP11.26□□□□□ -0.61
MDC1-202ENST00000416571 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 DUSP12Q9UNI6 340 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 C2orf16Q68DN1 1984 aa11.26□□□□□ -0.61
MDC1-202ENST00000416571 TMEM150BA6NC51 233 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 MEIS3P2A8K0S8 358 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 ZNF623O75123 536 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 OFD1O75665 1012 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 ALDH2P05091 517 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 URODP06132 367 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 GBP2P32456 591 aaPredicted RBP11.25□□□□□ -0.61
MDC1-202ENST00000416571 ID4P47928 161 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 CLCN4P51793 760 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 NLRP5P59047 1200 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 NONOQ15233 471 aaKnown RBP eCLIP11.25□□□□□ -0.61
MDC1-202ENST00000416571 ANGPT1Q15389 498 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 BMP2KLQ5H9B9 411 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 BLOC1S2Q6QNY1 142 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 C15orf39Q6ZRI6 1047 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 SIX5Q8N196 739 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
MDC1-202ENST00000416571 STAMQ92783 540 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
MDC1-202ENST00000416571 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 KCNK12Q9HB15 430 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 IGSF9Q9P2J2 1179 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 KANSL3Q9P2N6 904 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 DPP7Q9UHL4 492 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 FAN1Q9Y2M0 1017 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 PCDHB2Q9Y5E7 798 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 FAM186AA6NE01 2351 aa11.25□□□□□ -0.61
MDC1-202ENST00000416571 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
MDC1-202ENST00000416571 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 C2CD2LO14523 706 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 PI15O43692 258 aa11.24□□□□□ -0.61
MDC1-202ENST00000416571 MAFO75444 373 aaPredicted RBP11.24□□□□□ -0.61
MDC1-202ENST00000416571 PSMD10O75832 226 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms