RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 OATP04181 439 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 CLK2P49760 499 aaKnown RBP10.57□□□□□ -0.72
LINC01238-201ENST00000416204 ZNF746Q6NUN9 644 aaPredicted RBP10.57□□□□□ -0.72
LINC01238-201ENST00000416204 GET4Q7L5D6 327 aaPredicted RBP10.57□□□□□ -0.72
LINC01238-201ENST00000416204 GLYCTKQ8IVS8 523 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 EXOC6Q8TAG9 804 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 RUBCNQ92622 972 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 TMEM87BQ96K49 555 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 B3GALT6Q96L58 329 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
LINC01238-201ENST00000416204 ARHGEF3Q9NR81 526 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 DACT1Q9NYF0 836 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 WNT16Q9UBV4 365 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 PRG3Q9Y2Y8 225 aaPredicted RBP10.57□□□□□ -0.72
LINC01238-201ENST00000416204 SIT1Q9Y3P8 196 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 IRAK3Q9Y616 596 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 CLUHO75153 1309 aa10.57□□□□□ -0.72
LINC01238-201ENST00000416204 OTOGLQ3ZCN5 2332 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 F8W810 466 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 SLC27A2O14975 620 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 INPPL1O15357 1258 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 POMCP01189 267 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 TBC1D8BQ0IIM8 1120 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 FUT2Q10981 343 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 GIT2Q14161 759 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 MTERF2Q49AM1 385 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 NIPA1Q7RTP0 329 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 PALB2Q86YC2 1186 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 MAML2Q8IZL2 1156 aaPredicted RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 RPP25Q9BUL9 199 aaKnown RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 GCOM2Q9BZD3 368 aaPredicted RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 MRPL17Q9NRX2 175 aaKnown RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 DLL3Q9NYJ7 618 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 IGSF9Q9P2J2 1179 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 CEP131Q9UPN4 1083 aa10.56□□□□□ -0.72
LINC01238-201ENST00000416204 TPRP12270 2363 aaKnown RBP10.56□□□□□ -0.72
LINC01238-201ENST00000416204 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 TEX28O15482 410 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 LILRB3O75022 631 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 SRFP11831 508 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 LIFRP42702 1097 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 RTN1Q16799 776 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 DCLRE1AQ6PJP8 1040 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 ZC3H14Q6PJT7 736 aaKnown RBP10.55□□□□□ -0.72
LINC01238-201ENST00000416204 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 RHPN2Q8IUC4 686 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 SMAP1Q8IYB5 467 aaPredicted RBP10.55□□□□□ -0.72
LINC01238-201ENST00000416204 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 SEMA4AQ9H3S1 761 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 PIDD1Q9HB75 910 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 WDR6Q9NNW5 1121 aaKnown RBP10.55□□□□□ -0.72
LINC01238-201ENST00000416204 DISC1Q9NRI5 854 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 NRBP2Q9NSY0 501 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 FAM105AQ9NUU6 356 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 BARHL2Q9NY43 387 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 NCDNQ9UBB6 729 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 RALYQ9UKM9 306 aaKnown RBP10.55□□□□□ -0.72
LINC01238-201ENST00000416204 MTF2Q9Y483 593 aaPredicted RBP10.55□□□□□ -0.72
LINC01238-201ENST00000416204 PCDHB2Q9Y5E7 798 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 NUMBLQ9Y6R0 609 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 ACACBO00763 2458 aa10.55□□□□□ -0.72
LINC01238-201ENST00000416204 WDR64B1ANS9 1081 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 NRP1O14786 923 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 URODP06132 367 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CD72P21854 359 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CDC27P30260 824 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 OR1G1P47890 313 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 ATXN1P54253 815 aaKnown RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 NTHL1P78549 312 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CSTF1Q05048 431 aaKnown RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 SNW1Q13573 536 aaKnown RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CREB3L3Q68CJ9 461 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 APOA5Q6Q788 366 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 TSSK4Q6SA08 328 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 SYNE3Q6ZMZ3 975 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 AGMOQ6ZNB7 445 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 PJA1Q8NG27 643 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 URGCPQ8TCY9 931 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CRYGNQ8WXF5 182 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms