RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 GSPT2Q8IYD1 628 aaKnown RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 SUCLA2Q9P2R7 463 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 FAN1Q9Y2M0 1017 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 PSMC1P62191 440 aaKnown RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 GLYCTKQ8IVS8 523 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 NOVA2Q9UNW9 492 aaKnown RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 ACOT2P49753 483 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 GPC5P78333 572 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 A8MXQ7 604 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 NCK2O43639 380 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 BAATQ14032 418 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 CENPUQ71F23 418 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 KLHL11Q9NVR0 708 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 HACL1Q9UJ83 578 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 ASNSD1Q9NWL6 643 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 DRP2Q13474 957 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 PPP1R2P3Q6NXS1 205 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 KLC3Q6P597 504 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 HVCN1Q96D96 273 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 TAF1CQ15572 869 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF70Q9UC06 446 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CYP2B6P20813 491 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 RECQLP46063 649 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 COG2Q14746 738 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ELMSAN1Q6PJG2 1045 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CTNND1O60716 968 aaKnown RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 PAMP19021 973 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 MTMR4Q9NYA4 1195 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 KCNH4Q9UQ05 1017 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 TECPR2O15040 1411 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 POLRMTO00411 1230 aaKnown RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 FAM102AQ5T9C2 384 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 MAP3K21Q5TCX8 1036 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF564Q8TBZ8 553 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CCHCR1Q8TD31 782 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 MRPL46Q9H2W6 279 aaKnown RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 LGALS16A8MUM7 142 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 C6orf222P0C671 652 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 GABPB1Q06547 395 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 PROM2Q8N271 834 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 GPD1LQ8N335 351 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 KLC2Q9H0B6 622 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
COL12A1-203ENST00000416123 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CFLARO15519 480 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 TTC4O95801 387 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 PPP4R4Q6NUP7 873 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 MX2P20592 715 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 ART3Q13508 389 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 CCDC197Q8NCU1 140 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 PCDHA10Q9Y5I2 948 aa11.34□□□□□ -0.59
COL12A1-203ENST00000416123 KCNA4P22459 653 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 STAT5BP51692 787 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 PLA2G4FQ68DD2 849 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 FMR1NBQ8N0W7 255 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 GMPSP49915 693 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 RHOT2Q8IXI1 618 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 CPS1P31327 1500 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DPEP1P16444 411 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 LRRC31Q6UY01 552 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 BZW1Q7L1Q6 419 aaKnown RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SP110Q9HB58 689 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 NNTQ13423 1086 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DHX40Q8IX18 779 aaKnown RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 TTC17Q96AE7 1141 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 ATXN7L3BQ96GX2 97 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 NDUFB10O96000 172 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 EPS15L1Q9UBC2 864 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms