RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZNF792Q3KQV3 632 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 ASPRV1Q53RT3 343 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 GPATCH4Q5T3I0 446 aaKnown RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 MAP3K21Q5TCX8 1036 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 MFSD14CQ5VZR4 134 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 SLC30A10Q6XR72 485 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 CATIPQ7Z7H3 387 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 MICU3Q86XE3 530 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 DIS3LQ8TF46 1054 aaKnown RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 KLHDC7BQ96G42 594 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 FGD4Q96M96 766 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PIGSQ96S52 555 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 OSGEPQ9NPF4 335 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PFDN2Q9UHV9 154 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 RPTORQ8N122 1335 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 DNAJC25-GNG10A0A024R161 153 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 KLF18A0A0U1RQI7 1052 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 SLC22A31A6NKX4 558 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 CYTH3O43739 400 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ZNF862O60290 1169 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 PPP1R11O60927 126 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 DTNBO60941 627 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 LILRB5O75023 590 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 REC8O95072 547 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 SGPL1O95470 568 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ALBP02768 609 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 GJB1P08034 283 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 CYBAP13498 195 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 LIG1P18858 919 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 CASTP20810 708 aaKnown RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 PTGS1P23219 599 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 COPB2P35606 906 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 NT5C2P49902 561 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 GYS2P54840 703 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ANAPC15P60006 121 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 EXOSC10Q01780 885 aaKnown RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 TROAPQ12815 778 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 BAATQ14032 418 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 OLFML2BQ68BL8 750 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 Q6ZUG5 572 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 EEPD1Q7L9B9 569 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 KIAA0907Q7Z7F0 614 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 GOLGA6L1Q8N7Z2 621 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 CHST13Q8NET6 341 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 THAP3Q8WTV1 239 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 CLEC4DQ8WXI8 215 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 TBC1D5Q92609 795 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ELMO3Q96BJ8 720 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 WDR89Q96FK6 387 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 TMEM87BQ96K49 555 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 USP26Q9BXU7 913 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 BRINP2Q9C0B6 783 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 PAK6Q9NQU5 681 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 TMEM260Q9NX78 707 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 SLC5A4Q9NY91 659 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 GMIPQ9P107 970 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 FBXO40Q9UH90 709 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ZMYM5Q9UJ78 669 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ZHX1Q9UKY1 873 aaPredicted RBP5.63□□□□□ -1.51
VPS41-205ENST00000414632 COL4A3BPQ9Y5P4 624 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 ASTN1O14525 1302 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 PDE4DIPQ5VU43 2346 aa5.63□□□□□ -1.51
VPS41-205ENST00000414632 GOLGA8AA7E2F4 631 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 GOLGA8BA8MQT2 603 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 DCDC2CA8MYV0 355 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 ADCY6O43306 1168 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 FARP2O94887 1054 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 SNAI1O95863 264 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 CTSBP07858 339 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 ACRP10323 421 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 RPS6KB1P23443 525 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 RGS19P49795 217 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 RPS6P62753 249 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 SSRP1Q08945 709 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 KRT32Q14532 448 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 TKFCQ3LXA3 575 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 ARSHQ5FYA8 562 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 TMEM63BQ5T3F8 832 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 GJC2Q5T442 439 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 BLOC1S2Q6QNY1 142 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 UNC5AQ6ZN44 842 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 SLCO4C1Q6ZQN7 724 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 RNF207Q6ZRF8 634 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 NOL8Q76FK4 1167 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 ARMCX2Q7L311 632 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 CYFIP1Q7L576 1253 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 C12orf40Q86WS4 652 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 FBXO11Q86XK2 927 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 WFDC8Q8IUA0 241 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 FBXO16Q8IX29 292 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 TAB3Q8N5C8 712 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 FAM133AQ8N9E0 248 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 ST13P5Q8NFI4 369 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms