RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SEC14L1Q92503 715 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 LENG9Q96B70 501 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 CEP83Q9Y592 693 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MSH4O15457 936 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MGRN1O60291 552 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 FTLP02792 175 aaPredicted RBP15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 VCAM1P19320 739 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 PTGIRP43119 386 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 LACTB2Q53H82 288 aaPredicted RBP15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 C2CD6Q53TS8 623 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 ARHGEF19Q8IW93 802 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 CERS5Q8N5B7 392 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 AGAP11Q8TF27 550 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 NSMCE1Q8WV22 266 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 C1orf54Q8WWF1 131 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MIEF2Q96C03 454 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 KCNQ5Q9NR82 932 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 TYW1Q9NV66 732 aaKnown RBP15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 SERPINB13Q9UIV8 391 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MYO3BQ8WXR4 1341 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 GDF11O95390 407 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MMP13P45452 471 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 FMO5P49326 533 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 GABPAQ06546 454 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 MAPK7Q13164 816 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 ATG4AQ8WYN0 398 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 INTS2Q9H0H0 1204 aaKnown RBP15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 KCNK9Q9NPC2 374 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 DONSONQ9NYP3 566 aa15.75■□□□□ 0.11
SEMA3F-202ENST00000413852 PDXKO00764 312 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 EEF2P13639 858 aaKnown RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 EZRP15311 586 aaKnown RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 COMTP21964 271 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 DRP2Q13474 957 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 DYDC1Q8WWB3 177 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 EIF2AK1Q9BQI3 630 aaKnown RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 FERP16591 822 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 CHKAP35790 457 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 RINT1Q6NUQ1 792 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 LLGL2Q6P1M3 1020 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 CCDC137Q6PK04 289 aaKnown RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 TRPM8Q7Z2W7 1104 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 CCDC105Q8IYK2 499 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 LBHD1Q9BQE6 289 aaPredicted RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 RAB17Q9H0T7 212 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 KDM4CQ9H3R0 1056 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 UBE2TQ9NPD8 197 aaPredicted RBP15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 TRPC6Q9Y210 931 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
SEMA3F-202ENST00000413852 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 NEBLO76041 1014 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 NOVP48745 357 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 RNASELQ05823 741 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 AUHQ13825 339 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 MPP2Q14168 576 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 EXOC3L1Q86VI1 746 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 GGA1Q9UJY5 639 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 PCNTO95613 3336 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 IGF2BP3O00425 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 ALDH5A1P51649 535 aaPredicted RBP15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 PIGWQ7Z7B1 504 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 HOOK3Q86VS8 718 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 PCDHB18PQ96TA0 734 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 FAM13AO94988 1023 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 ANP32DO95626 131 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 TMEM253P0C7T8 217 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 ZNF76P36508 570 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 CNGA2Q16280 664 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 EPC2Q52LR7 807 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 ECT2Q9H8V3 914 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 SAMD15Q9P1V8 674 aa15.73■□□□□ 0.11
SEMA3F-202ENST00000413852 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 DNAJC8O75937 253 aaPredicted RBP15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 SGPL1O95470 568 aa15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 RPA1P27694 616 aa15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 HP1BP3Q5SSJ5 553 aaPredicted RBP15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 TLDC1Q6P9B6 456 aa15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 RPUSD2Q8IZ73 545 aaKnown RBP15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEMA3F-202ENST00000413852 TRIM7Q9C029 511 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms