RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 THEGQ9P2T0 379 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 SSX2IPQ9Y2D8 614 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 PCDHB6Q9Y5E3 794 aa7.09□□□□□ -1.27
USP54-202ENST00000413442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 A0A1B0GUA9 196 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 LCHNA4D1U4 455 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 POTEMA6NI47 508 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 INPPL1O15357 1258 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 LPXNO60711 386 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 MED24O75448 989 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 ALDH2P05091 517 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 HSP90AA1P07900 732 aaKnown RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 SRGAP2CP0DJJ0 459 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 SYT1P21579 422 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 GUCY2CP25092 1073 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CTNNB1P35222 781 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 UBA7P41226 1012 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CYP4A11Q02928 519 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 ADGRE1Q14246 886 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 MAPK6Q16659 721 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 KYAT1Q16773 422 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 PLA2G4FQ68DD2 849 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 TWF2Q6IBS0 349 aaKnown RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 FAM117BQ6P1L5 589 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 SLC27A1Q6PCB7 646 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 HSCBQ8IWL3 235 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 LRRC43Q8N309 656 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 SYT2Q8N9I0 419 aaPredicted RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 URGCPQ8TCY9 931 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 PIGOQ8TEQ8 1089 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 TMEM143Q96AN5 459 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CDK5RAP3Q96JB5 506 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 NLRP4Q96MN2 994 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 ZNF396Q96N95 335 aaPredicted RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 ASB2Q96Q27 587 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 ADPGKQ9BRR6 497 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 TMEM175Q9BSA9 504 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 OSBPL7Q9BZF2 842 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CCSER1Q9C0I3 900 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 LRRC27Q9C0I9 530 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CSRNP2Q9H175 543 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 FZD8Q9H461 694 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 NSUN3Q9H649 340 aaKnown RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 NGRNQ9NPE2 291 aaKnown RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 SPG21Q9NZD8 308 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 LARSQ9P2J5 1176 aaKnown RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 WRAP73Q9P2S5 460 aaPredicted RBP7.08□□□□□ -1.28
USP54-202ENST00000413442 CCDC39Q9UFE4 941 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 DPP7Q9UHL4 492 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 CFAP45Q9UL16 551 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 ODF2LQ9ULJ1 636 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 PLAGL2Q9UPG8 496 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 KIAA1024Q9UPX6 916 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 GIT1Q9Y2X7 761 aa7.08□□□□□ -1.28
USP54-202ENST00000413442 TBKBP1A7MCY6 615 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 INO80B-WBP1J3KQ70 363 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 K7ERI5 159 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 ACKR2O00590 384 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 N4BP3O15049 544 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 STX6O43752 255 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 MGEA5O60502 916 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 ABCB7O75027 752 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 LINC00271P0C7V0 271 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 SRGAP2BP0DMP2 458 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 PAX3P23760 479 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 DDIT3P35638 169 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 TXLNAP40222 546 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 POU5F1Q01860 360 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 SPOUT1Q5T280 376 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 CDCA2Q69YH5 1023 aaPredicted RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 ZNF579Q8NAF0 562 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 SPPL3Q8TCT6 385 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 LINC01599Q8WXQ3 324 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 MRPS27Q92552 414 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 ZBTB10Q96DT7 871 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 PABPC5Q96DU9 382 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 ZNF558Q96NG5 402 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 CASD1Q96PB1 797 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 FAM193BQ96PV7 902 aaPredicted RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 PYM1Q9BRP8 204 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 C17orf80Q9BSJ5 609 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 TRIM6Q9C030 488 aaPredicted RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 XPNPEP1Q9NQW7 623 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 BMP2KQ9NSY1 1161 aaPredicted RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 DDX19AQ9NUU7 478 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 TYW1Q9NV66 732 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 STK17AQ9UEE5 414 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 PIN4Q9Y237 131 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 PCDHB2Q9Y5E7 798 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 SRPRBQ9Y5M8 271 aaKnown RBP7.07□□□□□ -1.28
USP54-202ENST00000413442 IRAK3Q9Y616 596 aa7.07□□□□□ -1.28
USP54-202ENST00000413442 MYH11P35749 1972 aa7.06□□□□□ -1.28
USP54-202ENST00000413442 VWA3AA6NCI4 1184 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms