RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CDR2LQ86X02 465 aaPredicted RBP14.58□□□□□ -0.08
SSB-203ENST00000413002 CMTR2Q8IYT2 770 aaKnown RBP14.58□□□□□ -0.08
SSB-203ENST00000413002 CPB2Q96IY4 423 aa14.58□□□□□ -0.08
SSB-203ENST00000413002 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
SSB-203ENST00000413002 RUSC1Q9BVN2 902 aa14.58□□□□□ -0.08
SSB-203ENST00000413002 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
SSB-203ENST00000413002 USP20Q9Y2K6 914 aa14.58□□□□□ -0.08
SSB-203ENST00000413002 PRUNE2Q8WUY3 3088 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 B4GALT5O43286 388 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 EYA4O95677 639 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 LIG1P18858 919 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 HOXA11P31270 313 aaPredicted RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 RAD51AP2Q09MP3 1159 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 ZNF598Q86UK7 904 aaKnown RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 SLC17A8Q8NDX2 589 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 HELQQ8TDG4 1101 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 LRRC15Q8TF66 581 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 CASD1Q96PB1 797 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 KIFC3Q9BVG8 833 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 CHST12Q9NRB3 414 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 AGPAT5Q9NUQ2 364 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 TYW1Q9NV66 732 aaKnown RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 DACT1Q9NYF0 836 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 TFIP11Q9UBB9 837 aaKnown RBP14.57□□□□□ -0.08
SSB-203ENST00000413002 STK24Q9Y6E0 443 aa14.57□□□□□ -0.08
SSB-203ENST00000413002 H3BNC9 293 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 TSPAN1O60635 241 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 ERLIN2O94905 339 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
SSB-203ENST00000413002 KARSQ15046 597 aaKnown RBP14.56□□□□□ -0.08
SSB-203ENST00000413002 SKIV2LQ15477 1246 aaKnown RBP14.56□□□□□ -0.08
SSB-203ENST00000413002 UBXN11Q5T124 520 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 LRRC55Q6ZSA7 311 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 CLP1Q92989 425 aaKnown RBP14.56□□□□□ -0.08
SSB-203ENST00000413002 EPSTI1Q96J88 318 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 ALG13Q9NP73 1137 aaKnown RBP14.56□□□□□ -0.08
SSB-203ENST00000413002 FAM105AQ9NUU6 356 aa14.56□□□□□ -0.08
SSB-203ENST00000413002 NPHP3-ACAD11A0A0J9YXS1 232 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 TTLL13PA6NNM8 815 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 GRM6O15303 877 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 BMP15O95972 392 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 PBX3P40426 434 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 UBA7P41226 1012 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 AMHR2Q16671 573 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 HYIQ5T013 277 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 RINT1Q6NUQ1 792 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 ABI1Q8IZP0 508 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 SAMD11Q96NU1 681 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 EIF2AQ9BY44 585 aaKnown RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 ZSCAN16Q9H4T2 348 aaPredicted RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 FBXO2Q9UK22 296 aaPredicted RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 INPP5FQ9Y2H2 1132 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 PCDHB2Q9Y5E7 798 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 PRRC2BQ5JSZ5 2229 aaKnown RBP14.55□□□□□ -0.08
SSB-203ENST00000413002 REV3LO60673 3130 aa14.55□□□□□ -0.08
SSB-203ENST00000413002 HIP1RO75146 1068 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 EDN1P05305 212 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 PLA2G4BP0C869 781 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 ARF4P18085 180 aaPredicted RBP14.54□□□□□ -0.08
SSB-203ENST00000413002 POU3F3P20264 500 aaPredicted RBP14.54□□□□□ -0.08
SSB-203ENST00000413002 LONP1P36776 959 aaKnown RBP14.54□□□□□ -0.08
SSB-203ENST00000413002 AFF1P51825 1210 aaKnown RBP14.54□□□□□ -0.08
SSB-203ENST00000413002 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 TMEM119Q4V9L6 283 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 C1orf186Q6ZWK4 172 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.54□□□□□ -0.08
SSB-203ENST00000413002 DAW1Q8N136 415 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 KLHL23Q8NBE8 558 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 DEPTORQ8TB45 409 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 CWH43Q9H720 699 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 HES2Q9Y543 173 aa14.54□□□□□ -0.08
SSB-203ENST00000413002 COL4A4P53420 1690 aaPredicted RBP14.54□□□□□ -0.08
SSB-203ENST00000413002 CCDC169A6NNP5 214 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 C5orf67F2Z3F1 127 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 EOMESO95936 686 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 ITGB1P05556 798 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
SSB-203ENST00000413002 PLCG1P19174 1290 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 DNAJB1P25685 340 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 PEX3P56589 373 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 MAPK7Q13164 816 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 AGMOQ6ZNB7 445 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 FAM43BQ6ZT52 329 aaPredicted RBP14.53□□□□□ -0.08
SSB-203ENST00000413002 ZBTB8OSQ8IWT0 167 aa14.53□□□□□ -0.08
SSB-203ENST00000413002 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms