RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CASD1Q96PB1 797 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 C11orf84Q9BUA3 381 aaPredicted RBP20.91■□□□□ 0.94
TRIM56-202ENST00000412507 PLVAPQ9BX97 442 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 TMEM117Q9H0C3 514 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 INO80B-WBP1J3KQ70 363 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 GRM6O15303 877 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 CYP11B2P19099 503 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 RESTQ13127 1097 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 SF3A1Q15459 793 aaKnown RBP20.9■□□□□ 0.94
TRIM56-202ENST00000412507 ZRSR1Q15695 479 aaKnown RBP20.9■□□□□ 0.94
TRIM56-202ENST00000412507 PTPROQ16827 1216 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 LONRF3Q496Y0 759 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 CLLU1OSQ5K130 101 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 HSCBQ8IWL3 235 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 HELQQ8TDG4 1101 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 LPPQ93052 612 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 TRAIPQ9BWF2 469 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 POLD4Q9HCU8 107 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 ALG13Q9NP73 1137 aaKnown RBP20.9■□□□□ 0.94
TRIM56-202ENST00000412507 FAM105AQ9NUU6 356 aa20.9■□□□□ 0.94
TRIM56-202ENST00000412507 TYW1Q9NV66 732 aaKnown RBP20.9■□□□□ 0.94
TRIM56-202ENST00000412507 SPTBN5Q9NRC6 3674 aaKnown RBP20.9■□□□□ 0.94
TRIM56-202ENST00000412507 LRRIQ4A6NIV6 560 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 ERLIN2O94905 339 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 EYA4O95677 639 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 HOXA11P31270 313 aaPredicted RBP20.89■□□□□ 0.93
TRIM56-202ENST00000412507 MBTD1Q05BQ5 628 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 ABI1Q8IZP0 508 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 P2RX5Q93086 422 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 CWH43Q9H720 699 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 THEGQ9P2T0 379 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 DNM3Q9UQ16 869 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 MTMR6Q9Y217 621 aa20.89■□□□□ 0.93
TRIM56-202ENST00000412507 TSPAN1O60635 241 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 BMP15O95972 392 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 SKIP12755 728 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 RAB27AP51159 221 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 FAM173BQ6P4H8 233 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 LRRC55Q6ZSA7 311 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 KLHL23Q8NBE8 558 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 BSNDQ8WZ55 320 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 CPB2Q96IY4 423 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 PNMA5Q96PV4 448 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 PLAGL2Q9UPG8 496 aa20.88■□□□□ 0.93
TRIM56-202ENST00000412507 MEIS3P2A8K0S8 358 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 STX6O43752 255 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 ZNF623O75123 536 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 CSPG5O95196 566 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 ITGB1P05556 798 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 PCBP1Q15365 356 aaKnown RBP eCLIP20.87■□□□□ 0.93
TRIM56-202ENST00000412507 AMHR2Q16671 573 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 HYIQ5T013 277 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 UBXN11Q5T124 520 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 COLGALT1Q8NBJ5 622 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 PLIN2Q99541 437 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 LMAN2LQ9H0V9 348 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 AAASQ9NRG9 546 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 PCDHB2Q9Y5E7 798 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 PCDHB12Q9Y5F1 795 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 CLIC4Q9Y696 253 aa20.87■□□□□ 0.93
TRIM56-202ENST00000412507 AXLP30530 894 aa20.86■□□□□ 0.93
TRIM56-202ENST00000412507 GRIN1Q05586 938 aa20.86■□□□□ 0.93
TRIM56-202ENST00000412507 TIGD5Q53EQ6 642 aa20.86■□□□□ 0.93
TRIM56-202ENST00000412507 LRRC43Q8N309 656 aa20.86■□□□□ 0.93
TRIM56-202ENST00000412507 SPPL3Q8TCT6 385 aa20.86■□□□□ 0.93
TRIM56-202ENST00000412507 B4GALT5O43286 388 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 ARF4P18085 180 aaPredicted RBP20.85■□□□□ 0.93
TRIM56-202ENST00000412507 LAG3P18627 525 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 DNAJB1P25685 340 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 NCBP1Q09161 790 aaKnown RBP20.85■□□□□ 0.93
TRIM56-202ENST00000412507 CAMK1Q14012 370 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 CDCA2Q69YH5 1023 aaPredicted RBP20.85■□□□□ 0.93
TRIM56-202ENST00000412507 NOTUMQ6P988 496 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
TRIM56-202ENST00000412507 CABP7Q86V35 215 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 ZBTB8OSQ8IWT0 167 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 PGBD4Q96DM1 585 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 CDK5RAP3Q96JB5 506 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 RUSC1Q9BVN2 902 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 EIF2AQ9BY44 585 aaKnown RBP20.85■□□□□ 0.93
TRIM56-202ENST00000412507 NT5C3AQ9H0P0 336 aa20.85■□□□□ 0.93
TRIM56-202ENST00000412507 CUL9Q8IWT3 2517 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 HSP90AA1P07900 732 aaKnown RBP20.84■□□□□ 0.93
TRIM56-202ENST00000412507 NAMPTP43490 491 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 TFF2Q03403 129 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 PPP2R5AQ15172 486 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 PTPAQ15257 358 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 TCEAL5Q5H9L2 206 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 RINT1Q6NUQ1 792 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 AGMOQ6ZNB7 445 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 CDR2LQ86X02 465 aaPredicted RBP20.84■□□□□ 0.93
TRIM56-202ENST00000412507 THNSL1Q8IYQ7 743 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 SMG8Q8ND04 991 aaKnown RBP20.84■□□□□ 0.93
TRIM56-202ENST00000412507 POF1BQ8WVV4 589 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 ATXN2LQ8WWM7 1075 aaKnown RBP20.84■□□□□ 0.93
TRIM56-202ENST00000412507 KIFAP3Q92845 792 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 AK8Q96MA6 479 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms