RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 LONRF2Q1L5Z9 754 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 COLEC12Q5KU26 742 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 ANKS6Q68DC2 871 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 KRT40Q6A162 431 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 KANSL1Q7Z3B3 1105 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 GLCCI1Q86VQ1 547 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 MSL3Q8N5Y2 521 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 KIAA1958Q8N8K9 716 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 ST8SIA2Q92186 375 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 WDR11Q9BZH6 1224 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 TANGO6Q9C0B7 1094 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 POFUT1Q9H488 388 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 PRDM12Q9H4Q4 367 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 NCOA5Q9HCD5 579 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 ALG13Q9NP73 1137 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 KCMF1Q9P0J7 381 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 SIRPGQ9P1W8 387 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 SFMBT1Q9UHJ3 866 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 ZNHIT2Q9UHR6 403 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 FZD1Q9UP38 647 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 PTCH2Q9Y6C5 1203 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 A0A0A6YYJ9 748 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 FAM83GA6ND36 823 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 MASP2O00187 686 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZNF185O15231 689 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ITGB1P05556 798 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 NAT1P18440 290 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ATP2B1P20020 1258 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZEB1P37275 1124 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 SMAD3P84022 425 aaKnown RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ROM1Q03395 351 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 RBL2Q08999 1139 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 MAP3K12Q12852 859 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 FOXI1Q12951 378 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 SQSTM1Q13501 440 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 SPIDRQ14159 915 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 TTC38Q5R3I4 469 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 HECTD2Q5U5R9 776 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 NAIF1Q69YI7 327 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZCCHC8Q6NZY4 707 aaKnown RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 NXPE1Q8N323 547 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 LPPQ93052 612 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZNF764Q96H86 408 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZNF496Q96IT1 587 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 CPPED1Q9BRF8 314 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 FDXACB1Q9BRP7 624 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 R3HDMLQ9H3Y0 253 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 MTG2Q9H4K7 406 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 RIOX1Q9H6W3 641 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 POLR3BQ9NW08 1133 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 DKK2Q9UBU2 259 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 PACSIN3Q9UKS6 424 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 MAP3K2Q9Y2U5 619 aa2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 EPN1Q9Y6I3 576 aaPredicted RBP2.4□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZMYM3Q14202 1370 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 UNC119BA6NIH7 251 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 GOLGA6L6A8MZA4 724 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 MFAP3LO75121 409 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 NCR1O76036 304 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PCDH8O95206 1070 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 NDUFA10O95299 355 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ABHD16AO95870 558 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 JUNP05412 331 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ATP2A2P16615 1042 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PTGS2P35354 604 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 FNTBP49356 437 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 NPEPPSP55786 919 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 SESN2P58004 480 aaPredicted RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 C21orf58P58505 322 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ADCY2Q08462 1091 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PTPAQ15257 358 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 GAGE13Q4V321 117 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZBTB41Q5SVQ8 909 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PIK3R6Q5UE93 754 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 METRNLQ641Q3 311 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 KCNV1Q6PIU1 500 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 BTNL9Q6UXG8 535 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 Q6YL49 198 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 BMP8AQ7Z5Y6 402 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PRIMA1Q86XR5 153 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 CHST14Q8NCH0 376 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 OR52N2Q8NGI0 321 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PMFBP1Q8TBY8 1022 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 THAP3Q8WTV1 239 aaPredicted RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ARL8AQ96BM9 186 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 SRPK1Q96SB4 655 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 NOL10Q9BSC4 688 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 MRPL4Q9BYD3 311 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 PITHD1Q9GZP4 211 aaPredicted RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 SERHL2Q9H4I8 314 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZMAT4Q9H898 229 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 INTS7Q9NVH2 962 aaKnown RBP2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 OXSMQ9NWU1 459 aa2.39□□□□□ -2.03
RNU2-55P-201ENST00000411146 CCDC78A2IDD5 438 aa2.38□□□□□ -2.03
RNU2-55P-201ENST00000411146 ZNF891A8MT65 544 aaPredicted RBP2.38□□□□□ -2.03
RNU2-55P-201ENST00000411146 CBX4O00257 560 aa2.38□□□□□ -2.03
RNU2-55P-201ENST00000411146 TGM5O43548 720 aa2.38□□□□□ -2.03
RNU2-55P-201ENST00000411146 OPHN1O60890 802 aa2.38□□□□□ -2.03
RNU2-55P-201ENST00000411146 ALDH1A2O94788 518 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms