RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CRKP46108 304 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.55e-11■■■■■ 39.9
PRPF40A-202ENST00000410080 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 UNC5CLQ8IV45 518 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 ANAPC7Q9UJX3 599 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PPP2R2CQ9Y2T4 447 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 INSRP06213 1382 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 M0QYV0 167 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 SERPINI2O75830 405 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 GSNP06396 782 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 CCDC197Q8NCU1 140 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 VPS11Q9H270 941 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 DIAPH2O60879 1101 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 LVRNQ6Q4G3 990 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 TMEM270Q6UE05 265 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PCP11498 1178 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PLCG1P19174 1290 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 ADD2P35612 726 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 WARS2Q9UGM6 360 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 ZNF335Q9H4Z2 1342 aaPredicted RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 COBLL1Q53SF7 1204 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PPP1R13BQ96KQ4 1090 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 TRIM33Q9UPN9 1127 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PNMA6FA0A0J9YX94 578 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 SUSD4Q5VX71 490 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 PIGBQ92521 554 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 MED4Q9NPJ6 270 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 TMEM63CQ9P1W3 806 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 C5orf58C9J3I9 102 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 NLRP10Q86W26 655 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 GCOM2Q9BZD3 368 aaPredicted RBP11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 SCINQ9Y6U3 715 aa11.94□□□□□ -0.5
PRPF40A-202ENST00000410080 CACNA1FO60840 1977 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 CIAO1O76071 339 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 DDX5P17844 614 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 CDK8P49336 464 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 JAK3P52333 1124 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TWF1Q12792 350 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 DPYDQ12882 1025 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 RINLQ6ZS11 566 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 C10orf53Q8N6V4 93 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 LDHAP00338 332 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ARHGEF7Q14155 803 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 APPL2Q8NEU8 664 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 AATKQ6ZMQ8 1374 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 AK8Q96MA6 479 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 LSM7Q9UK45 103 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ADGRA2Q96PE1 1338 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 H0YC42 278 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 VCAM1P19320 739 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TMPRSS15P98073 1019 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 IL31Q6EBC2 164 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ALDH1A3P47895 512 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 RBL2Q08999 1139 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 CCNYL1Q8N7R7 359 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 HES6Q96HZ4 224 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 FMO2Q99518 471 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 RFX3P48380 749 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 SWSAP1Q6NVH7 229 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 FEM1BQ9UK73 627 aa11.93□□□□□ -0.5
PRPF40A-202ENST00000410080 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 LMNAP02545 664 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 TDRD7Q8NHU6 1098 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 PAWRQ96IZ0 340 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 CASP14P31944 242 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SOAT1P35610 550 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 FASTKD1Q53R41 847 aaKnown RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SPATA1Q5VX52 437 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SNX31Q8N9S9 440 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 P4HA2O15460 535 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 MAGEF1Q9HAY2 307 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 SAYSD1Q9NPB0 183 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 PCSK1NQ9UHG2 260 aa11.92□□□□□ -0.5
PRPF40A-202ENST00000410080 ZMYM1Q5SVZ6 1142 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms