RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 NCKAP1LP55160 1127 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 CAMK4Q16566 473 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 KMT5BQ4FZB7 885 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 TSHZ1Q6ZSZ6 1077 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 TMEM40Q8WWA1 233 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 MRPL44Q9H9J2 332 aaKnown RBP22.74■■□□□ 1.23
C4orf48-202ENST00000409860 OLFML3Q9NRN5 406 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 RMND1Q9NWS8 449 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 ARHGAP28Q9P2N2 729 aa22.74■■□□□ 1.23
C4orf48-202ENST00000409860 RPS6KA5O75582 802 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 ABCD1P33897 745 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 LPIN1Q14693 890 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 MBTPS1Q14703 1052 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 NFKBIBQ15653 356 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 FAM26FQ5R3K3 315 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 LBHD1Q9BQE6 289 aaPredicted RBP22.73■■□□□ 1.23
C4orf48-202ENST00000409860 TBC1D7Q9P0N9 293 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 NOC2LQ9Y3T9 749 aaKnown RBP22.73■■□□□ 1.23
C4orf48-202ENST00000409860 ADGRA3Q8IWK6 1321 aa22.73■■□□□ 1.23
C4orf48-202ENST00000409860 DNAH12Q6ZR08 3092 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 GPR182O15218 404 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 NBNO60934 754 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 MBTD1Q05BQ5 628 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 PAK2Q13177 524 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 KCNB1Q14721 858 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 PCBP1Q15365 356 aaKnown RBP eCLIP22.72■■□□□ 1.23
C4orf48-202ENST00000409860 MAPK6Q16659 721 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 STXBP4Q6ZWJ1 553 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 HAUS6Q7Z4H7 955 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 TMEM161BQ8NDZ6 487 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 BADQ92934 168 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 SYAP1Q96A49 352 aaPredicted RBP22.72■■□□□ 1.23
C4orf48-202ENST00000409860 GSDMAQ96QA5 445 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 FIZ1Q96SL8 496 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 TMEM134Q9H6X4 195 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 PRMT7Q9NVM4 692 aaPredicted RBP22.72■■□□□ 1.23
C4orf48-202ENST00000409860 PCDHA5Q9Y5H7 936 aa22.72■■□□□ 1.23
C4orf48-202ENST00000409860 DENND3A2RUS2 1198 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 K7ERI5 159 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 CSDE1O75534 798 aaKnown RBP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 ERLIN2O94905 339 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 GCNT3O95395 438 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 NMT1P30419 496 aaKnown RBP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 FPGSQ05932 587 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 EHHADHQ08426 723 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 PSMD2Q13200 908 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 PPIGQ13427 754 aaKnown RBP eCLIP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 ALCAMQ13740 583 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 KLHL40Q2TBA0 621 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 SKOR2Q2VWA4 1001 aaPredicted RBP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 CATSPER4Q7RTX7 472 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 FAM228AQ86W67 206 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 RPUSD2Q8IZ73 545 aaKnown RBP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 ERCC4Q92889 916 aaPredicted RBP22.71■■□□□ 1.23
C4orf48-202ENST00000409860 ST6GALNAC4Q9H4F1 302 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 MINDY3Q9H8M7 445 aa22.71■■□□□ 1.23
C4orf48-202ENST00000409860 RHOBTB3O94955 611 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 CXCL10P02778 98 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 PRKCBP05771 671 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 PFKMP08237 780 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 CSF2RAP15509 400 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 CD52P31358 61 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 NFX1Q12986 1120 aaKnown RBP22.7■■□□□ 1.22
C4orf48-202ENST00000409860 STRN3Q13033 797 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 CCDC183Q5T5S1 534 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 PPP4R3CPQ6ZMV5 832 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 ZNF720Q7Z2F6 126 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 DEFB128Q7Z7B8 93 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 SPATA20Q8TB22 786 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 SEPT8Q92599 483 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 KCNN1Q92952 543 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 HVCN1Q96D96 273 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 PRIMPOLQ96LW4 560 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 IFIH1Q9BYX4 1025 aaKnown RBP22.7■■□□□ 1.22
C4orf48-202ENST00000409860 CCDC113Q9H0I3 377 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 AGO3Q9H9G7 860 aaKnown RBP22.7■■□□□ 1.22
C4orf48-202ENST00000409860 ST3GAL5Q9UNP4 418 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 PCDHB13Q9Y5F0 798 aa22.7■■□□□ 1.22
C4orf48-202ENST00000409860 MKI67P46013 3256 aaKnown RBP22.69■■□□□ 1.22
C4orf48-202ENST00000409860 TANC1Q9C0D5 1861 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 FGFR4P22455 802 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 NCBP1Q09161 790 aaKnown RBP22.69■■□□□ 1.22
C4orf48-202ENST00000409860 GPNMBQ14956 572 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 FAM187BQ17R55 369 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 APBB2Q92870 758 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 HPS3Q969F9 1004 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 GTPBP4Q9BZE4 634 aaKnown RBP22.69■■□□□ 1.22
C4orf48-202ENST00000409860 OSBPL7Q9BZF2 842 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 FZD8Q9H461 694 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 ERVK-5Q9HDB9 667 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 KIAA1468Q9P260 1216 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 PADI3Q9ULW8 664 aa22.69■■□□□ 1.22
C4orf48-202ENST00000409860 MYBP10242 640 aa22.68■■□□□ 1.22
C4orf48-202ENST00000409860 SARSP49591 514 aaKnown RBP22.68■■□□□ 1.22
C4orf48-202ENST00000409860 GTF2BQ00403 316 aa22.68■■□□□ 1.22
C4orf48-202ENST00000409860 TMEM132AQ24JP5 1023 aa22.68■■□□□ 1.22
C4orf48-202ENST00000409860 PLEKHG4Q58EX7 1191 aa22.68■■□□□ 1.22
C4orf48-202ENST00000409860 NT5DC1Q5TFE4 455 aa22.68■■□□□ 1.22
C4orf48-202ENST00000409860 FAM43BQ6ZT52 329 aaPredicted RBP22.68■■□□□ 1.22
C4orf48-202ENST00000409860 SLC39A2Q9NP94 309 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms