RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 PHLPP2Q6ZVD8 1323 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 CDH23Q9H251 3354 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 C9IYK1 514 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 SLC12A3P55017 1021 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 MBTD1Q05BQ5 628 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 RRAGBQ5VZM2 374 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 CDCA2Q69YH5 1023 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 NOTUMQ6P988 496 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 CCDC73Q6ZRK6 1079 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 C1orf186Q6ZWK4 172 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 Q7L0L9 218 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 CMTR2Q8IYT2 770 aaKnown RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 RSPH1Q8WYR4 309 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 CCDC51Q96ER9 411 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 PRIMPOLQ96LW4 560 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 FAM161BQ96MY7 647 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 SAMD11Q96NU1 681 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 TGS1Q96RS0 853 aaKnown RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 RUSC1Q9BVN2 902 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 PRMT7Q9NVM4 692 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-205ENST00000409810 TMEM161AQ9NX61 479 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 MTMR10Q9NXD2 777 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 KIAA1671Q9BY89 1806 aa12.06□□□□□ -0.48
CHMP3-205ENST00000409810 A0A0U1RQF3 1178 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 LCHNA4D1U4 455 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 LINC01553A4QN01 128 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 CUTAO60888 179 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 HIP1RO75146 1068 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 DGKIO75912 1065 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 EOMESO95936 686 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 KRT18P05783 430 aaKnown RBP12.05□□□□□ -0.48
CHMP3-205ENST00000409810 NCLP19338 710 aaKnown RBP12.05□□□□□ -0.48
CHMP3-205ENST00000409810 STAT6P42226 847 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 ME1P48163 572 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 EFNA5P52803 228 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 FAM189BP81408 668 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 TAP1Q03518 808 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 BTG3Q14201 252 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-205ENST00000409810 MAPK6Q16659 721 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 GPBP1Q86WP2 473 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 ABI1Q8IZP0 508 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 FIBCD1Q8N539 461 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 ZNF689Q96CS4 500 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-205ENST00000409810 GAS2L1Q99501 681 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-205ENST00000409810 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
CHMP3-205ENST00000409810 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 TSPAN1O60635 241 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 DDIT3P35638 169 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 SMTNP53814 917 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 PEX3P56589 373 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 ERVK-21P61565 698 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 FAM187BQ17R55 369 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 HACE1Q8IYU2 909 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 CNNM3Q8NE01 707 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 BSNDQ8WZ55 320 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 PGBD4Q96DM1 585 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 TRIM6Q9C030 488 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 SCAND2PQ9GZW5 306 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 RC3H2Q9HBD1 1191 aaKnown RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 BLOC1S4Q9NUP1 217 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 FAM105AQ9NUU6 356 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 FAM13BQ9NYF5 915 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 LARSQ9P2J5 1176 aaKnown RBP12.04□□□□□ -0.48
CHMP3-205ENST00000409810 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
CHMP3-205ENST00000409810 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 TBKBP1A7MCY6 615 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 H0YCG3 227 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 N4BP3O15049 544 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 ZNF623O75123 536 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 TBCAO75347 108 aaKnown RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 FAM13AO94988 1023 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 PRKCBP05771 671 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 PLS3P13797 630 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 MCM6Q14566 821 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 SV2BQ7L1I2 683 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 APBB1IPQ7Z5R6 666 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 CRIPAKQ8N1N5 446 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms