RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TLL1O43897 1013 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 ARHGEF15O94989 841 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 UPP2O95045 317 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 SARSP49591 514 aaKnown RBP24.74■■□□□ 1.55
PTCD3-203ENST00000409783 RAD51AP2Q09MP3 1159 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 PPP2R5AQ15172 486 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 E2F4Q16254 413 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 CCDC73Q6ZRK6 1079 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 TIFAQ96CG3 184 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 DRC1Q96MC2 740 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 RAD9AQ99638 391 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 SCAND2PQ9GZW5 306 aaPredicted RBP24.74■■□□□ 1.55
PTCD3-203ENST00000409783 NKX2-4Q9H2Z4 354 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 RC3H2Q9HBD1 1191 aaKnown RBP24.74■■□□□ 1.55
PTCD3-203ENST00000409783 LCHNA4D1U4 455 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 SFI1A8K8P3 1242 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 INO80B-WBP1J3KQ70 363 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 TSPAN1O60635 241 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 ZSCAN20P17040 1043 aaPredicted RBP24.73■■□□□ 1.55
PTCD3-203ENST00000409783 PCBP1Q15365 356 aaKnown RBP eCLIP24.73■■□□□ 1.55
PTCD3-203ENST00000409783 NPAS4Q8IUM7 802 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 PDILTQ8N807 584 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 REEP2Q9BRK0 252 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 ZBED2Q9BTP6 218 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 TRAIPQ9BWF2 469 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 CCDC113Q9H0I3 377 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 TTYH1Q9H313 450 aaPredicted RBP24.73■■□□□ 1.55
PTCD3-203ENST00000409783 FZD8Q9H461 694 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 TSHZ2Q9NRE2 1034 aa24.73■■□□□ 1.55
PTCD3-203ENST00000409783 PIN4Q9Y237 131 aaKnown RBP24.73■■□□□ 1.55
PTCD3-203ENST00000409783 CA3P07451 260 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 NPTX2P47972 431 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 CACNB1Q02641 598 aaPredicted RBP24.72■■□□□ 1.55
PTCD3-203ENST00000409783 GIT2Q14161 759 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 ADALQ6DHV7 355 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 PPP4R3CPQ6ZMV5 832 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 SP7Q8TDD2 431 aaPredicted RBP24.72■■□□□ 1.55
PTCD3-203ENST00000409783 ZNF689Q96CS4 500 aaPredicted RBP24.72■■□□□ 1.55
PTCD3-203ENST00000409783 IFT74Q96LB3 600 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 KIFC3Q9BVG8 833 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 C17orf75Q9HAS0 396 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 ODF2LQ9ULJ1 636 aa24.72■■□□□ 1.55
PTCD3-203ENST00000409783 FNDC1Q4ZHG4 1894 aaPredicted RBP24.71■■□□□ 1.55
PTCD3-203ENST00000409783 TMEM265A0A087WTH1 108 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 DGKIO75912 1065 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 STAT6P42226 847 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 PEX3P56589 373 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 FAM187BQ17R55 369 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 NTPCRQ9BSD7 190 aaKnown RBP24.71■■□□□ 1.55
PTCD3-203ENST00000409783 C2orf40Q9H1Z8 148 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 ELAC1Q9H777 363 aaKnown RBP24.71■■□□□ 1.55
PTCD3-203ENST00000409783 GDPD2Q9HCC8 539 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 RBM19Q9Y4C8 960 aaKnown RBP24.71■■□□□ 1.55
PTCD3-203ENST00000409783 INSL6Q9Y581 213 aa24.71■■□□□ 1.55
PTCD3-203ENST00000409783 A0A0U1RQF3 1178 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 B4GALT5O43286 388 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 EDN1P05305 212 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 PLS3P13797 630 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ATF7P17544 494 aaPredicted RBP24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ZNF131P52739 623 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 UBXN11Q5T124 520 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ZNF598Q86UK7 904 aaKnown RBP24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ECHDC2Q86YB7 292 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ZBTB8OSQ8IWT0 167 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 DEPTORQ8TB45 409 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 SPIRE2Q8WWL2 714 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 TMEM161AQ9NX61 479 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 DACT1Q9NYF0 836 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 ARHGAP28Q9P2N2 729 aa24.7■■□□□ 1.54
PTCD3-203ENST00000409783 MYMKA6NI61 221 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 TTLL13PA6NNM8 815 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 ERLIN2O94905 339 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 STAG3L1P0CL83 205 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 ARF4P18085 180 aaPredicted RBP24.69■■□□□ 1.54
PTCD3-203ENST00000409783 CMA1P23946 247 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 AXLP30530 894 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 TAP1Q03518 808 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 DMP1Q13316 513 aaPredicted RBP24.69■■□□□ 1.54
PTCD3-203ENST00000409783 Q7L0L9 218 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 SV2BQ7L1I2 683 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 TAS1R3Q7RTX0 852 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 DNAJC19Q96DA6 116 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 CPB2Q96IY4 423 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 PRIMPOLQ96LW4 560 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 SEMA6BQ9H3T3 888 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 RNF19AQ9NV58 838 aa24.69■■□□□ 1.54
PTCD3-203ENST00000409783 PRMT7Q9NVM4 692 aaPredicted RBP24.69■■□□□ 1.54
PTCD3-203ENST00000409783 LINC01553A4QN01 128 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 ZNF697Q5TEC3 545 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 TWF2Q6IBS0 349 aaKnown RBP24.68■■□□□ 1.54
PTCD3-203ENST00000409783 SPRED2Q7Z698 418 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 YME1L1Q96TA2 773 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 ZNF576Q9H609 170 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 SLC28A3Q9HAS3 691 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 FAM105AQ9NUU6 356 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 KBTBD4Q9NVX7 518 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 FAM13BQ9NYF5 915 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 HPSEQ9Y251 543 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 PCDHB7Q9Y5E2 793 aa24.68■■□□□ 1.54
PTCD3-203ENST00000409783 CNTNAP2Q9UHC6 1331 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms