RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 TMEM161BQ8NDZ6 487 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 TRPV1Q8NER1 839 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 RAET1EQ8TD07 263 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 PXYLP1Q8TE99 480 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 BAP1Q92560 729 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 ARMC5Q96C12 935 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 PCYT2Q99447 389 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 LSM14BQ9BX40 385 aaKnown RBP15.41■□□□□ 0.06
LIMS2-206ENST00000409754 NUCKS1Q9H1E3 243 aaKnown RBP15.41■□□□□ 0.06
LIMS2-206ENST00000409754 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 EXOC7Q9UPT5 735 aa15.41■□□□□ 0.06
LIMS2-206ENST00000409754 EPN1Q9Y6I3 576 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-206ENST00000409754 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
LIMS2-206ENST00000409754 GTPBP10A4D1E9 387 aaKnown RBP15.4■□□□□ 0.06
LIMS2-206ENST00000409754 NOL4O94818 638 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 NDUFA10O95299 355 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 ARIH2O95376 493 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 INHAP05111 366 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 ABCD1P33897 745 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 CYP2J2P51589 502 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 ARHGEF6Q15052 776 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 MTFR1Q15390 333 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 MTERF2Q49AM1 385 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-206ENST00000409754 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
LIMS2-206ENST00000409754 MAP3K21Q5TCX8 1036 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 PDXDC1Q6P996 788 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 MYRIPQ8NFW9 859 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 ZNF592Q92610 1267 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 ZNF333Q96JL9 665 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 PLCB1Q9NQ66 1216 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 KMT5AQ9NQR1 393 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 NRBP2Q9NSY0 501 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
LIMS2-206ENST00000409754 KIAA0100Q14667 2235 aaKnown RBP15.4■□□□□ 0.06
LIMS2-206ENST00000409754 CCDC169A6NNP5 214 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 H0YCG3 227 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 EXOC3O60645 756 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CYP2C19P33261 490 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CYLC1P35663 651 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 STAT5BP51692 787 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 EMC2Q15006 297 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CCDC62Q6P9F0 684 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 DPP9Q86TI2 863 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 MAP4K3Q8IVH8 894 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 FBXO16Q8IX29 292 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 SLAIN1Q8ND83 568 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 SYN2Q92777 582 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 KCNN1Q92952 543 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 IFT74Q96LB3 600 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CRACR2AQ9BSW2 395 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 KATNBL1Q9H079 304 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 DHX33Q9H6R0 707 aaKnown RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 TBX20Q9UMR3 447 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 PHLPP2Q6ZVD8 1323 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 MAPK13O15264 365 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 LGR5O75473 907 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 SCP2P22307 547 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 TCF7P36402 384 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 RFC5P40937 340 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 SYT10Q6XYQ8 523 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 ARMCX2Q7L311 632 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 ZNF467Q7Z7K2 595 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 ACRBPQ8NEB7 543 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 GPR20Q99678 358 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 POLR3FQ9H1D9 316 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 GANQ9H2C0 597 aa15.39■□□□□ 0.05
LIMS2-206ENST00000409754 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
LIMS2-206ENST00000409754 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 EIF3CLB5ME19 914 aaKnown RBP15.38■□□□□ 0.05
LIMS2-206ENST00000409754 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
LIMS2-206ENST00000409754 SNAI1O95863 264 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-206ENST00000409754 HMGCRP04035 888 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 SOX10P56693 466 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-206ENST00000409754 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 XXYLT1Q8NBI6 393 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 EIF3CQ99613 913 aaKnown RBP15.38■□□□□ 0.05
LIMS2-206ENST00000409754 AZI2Q9H6S1 392 aa15.38■□□□□ 0.05
LIMS2-206ENST00000409754 UQCRHLA0A096LP55 91 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms