RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 NPEPPSP55786 919 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 DUPD1Q68J44 220 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 CHADLQ6NUI6 762 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 TATDN1Q6P1N9 297 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ECT2Q9H8V3 914 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ZDHHC18Q9NUE0 388 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-205ENST00000409455 ATAD5Q96QE3 1844 aa16.69■□□□□ 0.26
LIMS2-205ENST00000409455 CETN3O15182 167 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 RARAP10276 462 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 NCALDP61601 193 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 PRPF4BQ13523 1007 aaKnown RBP16.68■□□□□ 0.26
LIMS2-205ENST00000409455 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
LIMS2-205ENST00000409455 SAAL1Q96ER3 474 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 NUDT12Q9BQG2 462 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 TMOD2Q9NZR1 351 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 INTUQ9ULD6 942 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 SLC37A4O43826 429 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 SNX3O60493 162 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 PEX19P40855 299 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 PRKCIP41743 596 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 PLTPP55058 493 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 CIAPIN1Q6FI81 312 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 TAOK1Q7L7X3 1001 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 RASAL2Q9UJF2 1139 aa16.68■□□□□ 0.26
LIMS2-205ENST00000409455 DIS3Q9Y2L1 958 aaKnown RBP16.68■□□□□ 0.26
LIMS2-205ENST00000409455 ATRNL1Q5VV63 1379 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 FAM187AA6NFU0 413 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SMNDC1O75940 238 aaKnown RBP eCLIP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SLC9A1P19634 815 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 IFI35P80217 286 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SLC29A2Q14542 456 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 CDCA2Q69YH5 1023 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 USP15Q9Y4E8 981 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 LIN7AO14910 233 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 LUC7L3O95232 432 aaKnown RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 TDP2O95551 362 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SNHG28P0DPA3 235 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 KLRC3Q07444 240 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 DHX34Q14147 1143 aaKnown RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 NLGN2Q8NFZ4 835 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 DYDC1Q8WWB3 177 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 RNF25Q96BH1 459 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 MOV10L1Q9BXT6 1211 aaKnown RBP16.67■□□□□ 0.26
LIMS2-205ENST00000409455 FGFBP2Q9BYJ0 223 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 TMEM260Q9NX78 707 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
LIMS2-205ENST00000409455 SUN1O94901 812 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 GDF11O95390 407 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 KIAA1755Q5JYT7 1200 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 KCTD10Q9H3F6 313 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 HOMER3Q9NSC5 361 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 PSME4Q14997 1843 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 NR2F2P24468 414 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 SMARCA1P28370 1054 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 COPS2P61201 443 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 LACTBP83111 547 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 ATP11AP98196 1134 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 CLUL1Q15846 466 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 PIGSQ96S52 555 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 SH3GL3Q99963 347 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 CORO1CQ9ULV4 474 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-205ENST00000409455 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
LIMS2-205ENST00000409455 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 ATP2A2P16615 1042 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 JAG1P78504 1218 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 MAP2K1Q02750 393 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 JAMLQ86YT9 394 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 SIAH1Q8IUQ4 282 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 U2AF1L4Q8WU68 220 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 SCFD1Q8WVM8 642 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 PRCCQ92733 491 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 MTRF1LQ9UGC7 380 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms