RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 MIER3Q7Z3K6 550 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PIK3R5Q8WYR1 880 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 C11orf70Q9BRQ4 267 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 PARVGQ9HBI0 331 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 KDM3AQ9Y4C1 1321 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 HIP1RO75146 1068 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 RPS6KA4O75676 772 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 OVGP1Q12889 678 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 SPOPLQ6IQ16 392 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ZNF365Q70YC5 407 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 SLC47A2Q86VL8 602 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 UBL4BQ8N7F7 174 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 P2RX7Q99572 595 aaKnown RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNX13-201ENST00000409076 USP21Q9UK80 565 aa8.97□□□□□ -0.97
SNX13-201ENST00000409076 TPX2Q9ULW0 747 aaKnown RBP8.97□□□□□ -0.97
SNX13-201ENST00000409076 E2F8A0AVK6 867 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 CRKP46108 304 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 SCTRP47872 440 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 RHBDL3P58872 404 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 KCNJ2P63252 427 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 ITGB3BPQ13352 177 aaPredicted RBP8.96□□□□□ -0.97
SNX13-201ENST00000409076 AOC3Q16853 763 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 TMEM237Q96Q45 408 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 LXNQ9BS40 222 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 YIPF3Q9GZM5 350 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 ISCUQ9H1K1 167 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 CENPFP49454 3210 aa8.96□□□□□ -0.97
SNX13-201ENST00000409076 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 FAM107AO95990 144 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 FMO5P49326 533 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 ZBTB16Q05516 673 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 KDM7AQ6ZMT4 941 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 HOOK3Q86VS8 718 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 IQCKQ8N0W5 287 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 RNF10Q8N5U6 811 aaKnown RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 SPOCK2Q92563 424 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 CHMP6Q96FZ7 201 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 XPO6Q96QU8 1125 aaKnown RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 GINS2Q9Y248 185 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 UBOX5O94941 541 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 MYL1P05976 194 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 BMP3P12645 472 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 KRT10P13645 584 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 GCKP35557 465 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 SOX5P35711 763 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 PPP1R2P41236 205 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 SGSM1Q2NKQ1 1148 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 EML3Q32P44 896 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 SYDE2Q5VT97 1194 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 BSPRYQ5W0U4 402 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 RNF207Q6ZRF8 634 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 IRF2BP2Q7Z5L9 587 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 POMGNT1Q8WZA1 660 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 SLC35C1Q96A29 364 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 AGBL1Q96MI9 1066 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 GLIS2Q9BZE0 524 aaPredicted RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 TAOK3Q9H2K8 898 aa8.96□□□□□ -0.98
SNX13-201ENST00000409076 CICQ96RK0 1608 aaPredicted RBP8.96□□□□□ -0.98
SNX13-201ENST00000409076 F8VZ95 297 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 PYGMP11217 842 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 CPA2P48052 419 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 KIAA1755Q5JYT7 1200 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 RINT1Q6NUQ1 792 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 JDP2Q8WYK2 163 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ZKSCAN4Q969J2 545 aaPredicted RBP8.95□□□□□ -0.98
SNX13-201ENST00000409076 GANQ9H2C0 597 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 KIF9Q9HAQ2 790 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 MAGEF1Q9HAY2 307 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 GDF3Q9NR23 364 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 TMOD2Q9NZR1 351 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ZNF148Q9UQR1 794 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 SPATA31A1Q5TZJ5 1347 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 M0R2N6 131 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 PEX10O60683 326 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ZSCAN5DPP0CG00 497 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 BRAFP15056 766 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 FERP16591 822 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 MAPK4P31152 587 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 SHMT1P34896 483 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 PCK1P35558 622 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 MXI1P50539 228 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX13-201ENST00000409076 KRT17Q04695 432 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 CCDC6Q16204 474 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 TMC3Q7Z5M5 1100 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 CBWD2Q8IUF1 395 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 SYCE1Q8N0S2 351 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 HIPK4Q8NE63 616 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 PBKQ96KB5 322 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms