RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TMOD4Q9NZQ9 345 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 MAN1A2O60476 641 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 TMED10P49755 219 aaKnown RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 DDR1Q08345 913 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 PDIA2Q13087 525 aaKnown RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 ZCWPW2Q504Y3 356 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CRELD2Q6UXH1 353 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 C1orf54Q8WWF1 131 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 TSSK1BQ9BXA7 367 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CALN1Q9BXU9 219 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 TRIM33Q9UPN9 1127 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 ANTXR2P58335 489 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 KYNUQ16719 465 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 SFR1Q86XK3 245 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 MCF2L2Q86YR7 1114 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 RNF34Q969K3 372 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 TTC7AQ9ULT0 858 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 ARHGAP22Q7Z5H3 698 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CCDC124Q96CT7 223 aaKnown RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 NSL1Q96IY1 281 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 TRIM15Q9C019 465 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 ADAMTS2O95450 1211 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 KPNA2P52292 529 aaKnown RBP18.82■□□□□ 0.6
SMPD4-202ENST00000409031 KDSRQ06136 332 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 B4GALNT2Q8NHY0 566 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CARD9Q9H257 536 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 CYP4F11Q9HBI6 524 aa18.82■□□□□ 0.6
SMPD4-202ENST00000409031 SLC35G2Q8TBE7 412 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 DEPDC1BQ8WUY9 529 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 HPS5Q9UPZ3 1129 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 ORC6Q9Y5N6 252 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 BTBD6Q96KE9 485 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 TRPV6Q9H1D0 765 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
SMPD4-202ENST00000409031 METP08581 1390 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 FAM205CA6NFA0 338 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 ABCC3O15438 1527 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 KITP10721 976 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 GRIN1Q05586 938 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 GPS1Q13098 491 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 RCN1Q15293 331 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 RHBDL2Q9NX52 303 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 ADAM22Q9P0K1 906 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 WARS2Q9UGM6 360 aaKnown RBP18.81■□□□□ 0.6
SMPD4-202ENST00000409031 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
SMPD4-202ENST00000409031 GSG1L2A8MUP6 293 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 TNNC2P02585 160 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 GLI1P08151 1106 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 CD44P16070 742 aaKnown RBP18.8■□□□□ 0.6
SMPD4-202ENST00000409031 BTDP43251 543 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 KCTD6Q8NC69 237 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 RGL1Q9NZL6 768 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 B2RBV5 119 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 ENO1P06733 434 aaKnown RBP18.8■□□□□ 0.6
SMPD4-202ENST00000409031 UCHL3P15374 230 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 MFSD14BQ5SR56 506 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 PIK3R5Q8WYR1 880 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 LZICQ8WZA0 190 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 CCDC17Q96LX7 622 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 EHD4Q9H223 541 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 SMYD2Q9NRG4 433 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 A6NJR5 290 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 CAPN9O14815 690 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 PROCA1Q8NCQ7 364 aaPredicted RBP18.8■□□□□ 0.6
SMPD4-202ENST00000409031 HDAC11Q96DB2 347 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 TRIP10Q15642 601 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
SMPD4-202ENST00000409031 MAP3K14Q99558 947 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 KIFC3Q9BVG8 833 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 BARHL2Q9NY43 387 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 L3MBTL1Q9Y468 752 aa18.8■□□□□ 0.6
SMPD4-202ENST00000409031 GOLGA8SH3BPF8 625 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 KDM1AO60341 852 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 ST3GAL1Q11201 340 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 ACAD11Q709F0 780 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■■□ 19.9
SMPD4-202ENST00000409031 RXFP1Q9HBX9 757 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 ABCA8O94911 1581 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 TARSP26639 723 aaKnown RBP18.79■□□□□ 0.6
SMPD4-202ENST00000409031 KLK7P49862 253 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 LBHD1Q9BQE6 289 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-202ENST00000409031 THTPAQ9BU02 230 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 TET3O43151 1660 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 E9PMD0 336 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 TRAPPC3O43617 180 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 LRRC36Q1X8D7 754 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 NLRP10Q86W26 655 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 TTLL3Q9Y4R7 772 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 RNF103-CHMP3A0A140T963 221 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms