RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 KLHL23Q8NBE8 558 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 ITFG2Q969R8 447 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 FAM20AQ96MK3 541 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 LXNQ9BS40 222 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 COG5Q9UP83 839 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 PCDHB7Q9Y5E2 793 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 A0A087WZ62 844 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 H3BQ06 376 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 MAFO75444 373 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 ITGB1P05556 798 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 TMOD1P28289 359 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 PBX3P40426 434 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 FAM189BP81408 668 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 ICE2Q659A1 982 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 FDXACB1Q9BRP7 624 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 TMEM60Q9H2L4 133 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 MED4Q9NPJ6 270 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 SUCLA2Q9P2R7 463 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 NOL7Q9UMY1 257 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 PLAGL2Q9UPG8 496 aa10.79□□□□□ -0.68
NIF3L1-202ENST00000409020 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 ATF7P17544 494 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 ATP2B1P20020 1258 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 DLX2Q07687 328 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 HYAL1Q12794 435 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 PTPROQ16827 1216 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 LRRC55Q6ZSA7 311 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 ADGRD2Q7Z7M1 963 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 RNF169Q8NCN4 708 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 TMEM143Q96AN5 459 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 NLRP4Q96MN2 994 aa10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 C11orf84Q9BUA3 381 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 TYW1Q9NV66 732 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-202ENST00000409020 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 TBX3O15119 743 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 LINC01565O15544 149 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 MARCH6O60337 910 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 SLITRK3O94933 977 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CD2BP2O95400 341 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 RB1P06400 928 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 P4HBP07237 508 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 IL9P15248 144 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 YWHABP31946 246 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 LTBRP36941 435 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 TXKP42681 527 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 EPHA7Q15375 998 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CALCRLQ16602 461 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 TIGD5Q53EQ6 642 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 SPPL3Q8TCT6 385 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CEP170P1Q96L14 293 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CASD1Q96PB1 797 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 MTMR9Q96QG7 549 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CWH43Q9H720 699 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 MINDY3Q9H8M7 445 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 CD320Q9NPF0 282 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 C1orf112Q9NSG2 853 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 TMEM161AQ9NX61 479 aa10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 FNDC1Q4ZHG4 1894 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-202ENST00000409020 POTEMA6NI47 508 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 NEMFO60524 1076 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 MCM4P33991 863 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 TRIM29Q14134 588 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 CLUL1Q15846 466 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 ECHDC2Q86YB7 292 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 NEK9Q8TD19 979 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 POF1BQ8WVV4 589 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 LPPQ93052 612 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 HSD17B14Q9BPX1 270 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 EIF2AK1Q9BQI3 630 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PLVAPQ9BX97 442 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 IGFLR1Q9H665 355 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 ATP6V0A4Q9HBG4 840 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 IFT122Q9HBG6 1241 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms