RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 NDRG2Q9UN36 371 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 AKT3Q9Y243 479 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 INPP5FQ9Y2H2 1132 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TTC41PQ6P2S7 1318 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SPEGQ15772 3267 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SETXQ7Z333 2677 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GCN1Q92616 2671 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ADAMTS20P59510 1910 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PALM3A6NDB9 673 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SPDYE3A6NKU9 549 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CHURC1-FNTBB4DL54 471 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KLRF2D3W0D1 207 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TM4SF5O14894 197 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 AXIN1O15169 862 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MAGEB2O15479 319 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 LILRB3O75022 631 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 RFPL2O75678 378 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 EPN2O95208 641 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SOD2P04179 222 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ALDH2P05091 517 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GALTP07902 379 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 HNRNPA1P09651 372 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CCDC192P0DO97 292 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CEACAM1P13688 526 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KCNA2P16389 499 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CD72P21854 359 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SFPQP23246 707 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FNTBP49356 437 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 WTAPQ15007 396 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SF3A2Q15428 464 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SOWAHCQ53LP3 525 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 IFIT1BQ5T764 474 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TWF2Q6IBS0 349 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PARM1Q6UWI2 310 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CACNA2D4Q7Z3S7 1137 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FAM200AQ8TCP9 573 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TMEM40Q8WWA1 233 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FGF14Q92915 247 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MAP4K1Q92918 833 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 IRF7Q92985 503 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZBTB10Q96DT7 871 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZSCAN10Q96SZ4 725 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PPP1R16BQ96T49 567 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KXD1Q9BQD3 176 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZKSCAN3Q9BRR0 538 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 NT5C3AQ9H0P0 336 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ADAMTS10Q9H324 1103 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CHST12Q9NRB3 414 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TBC1D13Q9NVG8 400 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KANSL3Q9P2N6 904 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SEC63Q9UGP8 760 aaKnown RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 DDX19BQ9UMR2 479 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FAN1Q9Y2M0 1017 aa4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MTF2Q9Y483 593 aaPredicted RBP4.39□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FRYQ5TBA9 3013 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GPR179Q6PRD1 2367 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PNMA6FA0A0J9YX94 578 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 H0Y626 953 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZNF213O14771 459 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TEX28O15482 410 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GAS2O43903 313 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ECI2O75521 394 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZMYND10O75800 440 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 RPP40O75818 363 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 AKAP3O75969 853 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PAPSS2O95340 614 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TRIM16O95361 564 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 VTNP04004 478 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TDGF1P13385 188 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SPINK2P20155 84 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CSRP1P21291 193 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 EIF4BP23588 611 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KIF5BP33176 963 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MPLP40238 635 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PHKA2P46019 1235 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SLC11A1P49279 550 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 NLRP11P59045 1033 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ACTR2P61160 394 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 HAND2P61296 217 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SATB1Q01826 763 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KARSQ15046 597 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ELF2Q15723 593 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PPM1LQ5SGD2 360 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SH3PXD2AQ5TCZ1 1133 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 HEATR6Q6AI08 1181 aaKnown RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PDXDC2PQ6P474 469 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GRASPQ7Z6J2 395 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 WDR5BQ86VZ2 330 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TMEM173Q86WV6 379 aaPredicted RBP4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PROSER1Q86XN7 944 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KIAA0319LQ8IZA0 1049 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SPEM1Q8N4L4 309 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GAB3Q8WWW8 586 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 NLRP7Q8WX94 980 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FAM3CQ92520 227 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FGF13Q92913 245 aa4.38□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZNF707Q96C28 371 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms