RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 EXOSC10Q01780 885 aaKnown RBP3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 GPR19Q15760 415 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 FIGNQ5HY92 759 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 OSTM1Q86WC4 334 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 ASB15Q8WXK1 588 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 DPF1Q92782 380 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 ERCC4Q92889 916 aaPredicted RBP3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 SHDQ96IW2 340 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 DCLRE1CQ96SD1 692 aaKnown RBP3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 CATSPERZQ9NTU4 200 aa3.16□□□□□ -1.9
MIR548I3-201ENST00000408378 CACNA1IQ9P0X4 2223 aa3.15□□□□□ -1.9
MIR548I3-201ENST00000408378 BLACEA4D250 179 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 AMY2AP04746 511 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 JUNP05412 331 aaKnown RBP3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 AMY2BP19961 511 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 SOX9P48436 509 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 POLGP54098 1239 aaPredicted RBP3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 ANTXR2P58335 489 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 AWAT2Q6E213 333 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 PLXDC1Q8IUK5 500 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 IFNL3Q8IZI9 196 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 TMEM87AQ8NBN3 555 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 CALML6Q8TD86 181 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 DCAF4Q8WV16 495 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 Q96MF0 132 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 GBP4Q96PP9 640 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 ALG1Q9BT22 464 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 MDFICQ9P1T7 246 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 CHST2Q9Y4C5 530 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 ZNF804BA4D1E1 1349 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 MAST3O60307 1309 aa3.15□□□□□ -1.91
MIR548I3-201ENST00000408378 JAM2P57087 298 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 PPP2R2AP63151 447 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 RESTQ13127 1097 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 PAK2Q13177 524 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 SEC23AQ15436 765 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 MIDNQ504T8 468 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 KIAA1614Q5VZ46 1190 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 ZNF626Q68DY1 528 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 DNAJC14Q6Y2X3 702 aaPredicted RBP3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 MAMDC2Q7Z304 686 aaPredicted RBP3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 CLEC14AQ86T13 490 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 VGLL2Q8N8G2 317 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 OR52N2Q8NGI0 321 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 LRIT1Q9P2V4 623 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 ARPP21Q9UBL0 812 aaPredicted RBP3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 HDAC5Q9UQL6 1122 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 KAT6AQ92794 2004 aa3.14□□□□□ -1.91
MIR548I3-201ENST00000408378 IGKV2D-30A0A075B6S6 120 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 CFBP00751 764 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 FDXRP22570 491 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 NHLH2Q02577 135 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 EIF2B5Q13144 721 aaKnown RBP3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 DDB1Q16531 1140 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 ZNF260Q3ZCT1 412 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 PDCD4Q53EL6 469 aaKnown RBP3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 PTF1AQ7RTS3 328 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 SAMD14Q8IZD0 417 aaPredicted RBP3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 SLC17A6Q9P2U8 582 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 DNAI1Q9UI46 699 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 NOTCH4Q99466 2003 aa3.13□□□□□ -1.91
MIR548I3-201ENST00000408378 SCDO00767 359 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 INSIG1O15503 277 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 HOXA3O43365 443 aaPredicted RBP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 DNAJC6O75061 913 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 HLA-DOAP06340 250 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 PYGMP11217 842 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 HNRNPLP14866 589 aaKnown RBP eCLIP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 TUBA4AP68366 448 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 FHL3Q13643 280 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 LARP1BQ659C4 914 aaKnown RBP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 KIAA1161Q6NSJ0 714 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 Q6ZNX1 250 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 FAM83AQ86UY5 434 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 XYLT1Q86Y38 959 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 FAM178BQ8IXR5 827 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 GLB1L3Q8NCI6 653 aaPredicted RBP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 OR5AN1Q8NGI8 311 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 ACTRT2Q8TDY3 377 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 NKD2Q969F2 451 aaPredicted RBP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 RPL36ALQ969Q0 106 aaKnown RBP3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 FOXJ2Q9P0K8 574 aa3.12□□□□□ -1.91
MIR548I3-201ENST00000408378 FOXP2O15409 715 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 DAPK3O43293 454 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 PRR35P0CG20 571 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 ZSCAN20P17040 1043 aaPredicted RBP3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 ITPKBP27987 946 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 CCKARP32238 428 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 NASPP49321 788 aaPredicted RBP3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 RACK1P63244 317 aaKnown RBP3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 MRPS35P82673 323 aaKnown RBP3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 HYAL1Q12794 435 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 NTRK3Q16288 839 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 ANAPC16Q96DE5 110 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 ZFYVE21Q9BQ24 234 aa3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 LSM14BQ9BX40 385 aaKnown RBP3.11□□□□□ -1.91
MIR548I3-201ENST00000408378 SPON1Q9HCB6 807 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms