RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PRPF31Q8WWY3 499 aaKnown RBP10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 CASD1Q96PB1 797 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 NACC1Q96RE7 527 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 SH2D3AQ9BRG2 576 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 TLE6Q9H808 572 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 FAM105AQ9NUU6 356 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 SPG21Q9NZD8 308 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 KANSL3Q9P2N6 904 aa10.11□□□□□ -0.79
SNORD88A-201ENST00000408314 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 H3BQ06 376 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 ATP2B1P20020 1258 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 FGFR4P22455 802 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 RARRES1P49788 294 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 RNASELQ05823 741 aaKnown RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 GIT2Q14161 759 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 CLLU1OSQ5K130 101 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 NOTUMQ6P988 496 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 ZBTB8OSQ8IWT0 167 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 FAM178BQ8IXR5 827 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 TMEM169Q96HH4 297 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 POLR3CQ9BUI4 534 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 NFKBIZQ9BYH8 718 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 CWH43Q9H720 699 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 IFT122Q9HBG6 1241 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 ENTPD7Q9NQZ7 604 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 WRAP73Q9P2S5 460 aaPredicted RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 CD207Q9UJ71 328 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 DBR1Q9UK59 544 aaKnown RBP10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 VCANP13611 3396 aa10.1□□□□□ -0.79
SNORD88A-201ENST00000408314 TCF20Q9UGU0 1960 aaKnown RBP10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 POTEMA6NI47 508 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 CSPG5O95196 566 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 ALADP13716 330 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 RPA1P27694 616 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 NRIP1P48552 1158 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 PTENP60484 403 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 ADAM15Q13444 863 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 CAMK1Q14012 370 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 SMC1AQ14683 1233 aaKnown RBP10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 PPP2R5AQ15172 486 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 NOMO2Q5JPE7 1267 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 TMC7Q7Z402 723 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 KSR1Q8IVT5 923 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 GJD3Q8N144 294 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 PRIMPOLQ96LW4 560 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 NECAB3Q96P71 396 aaPredicted RBP10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 FAM193BQ96PV7 902 aaPredicted RBP10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 KIF2CQ99661 725 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 TCF25Q9BQ70 676 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 TRIM6Q9C030 488 aaPredicted RBP10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 C2orf40Q9H1Z8 148 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 RSAD1Q9HA92 442 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 RNF19AQ9NV58 838 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 ZMYM2Q9UBW7 1377 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 REV3LO60673 3130 aa10.09□□□□□ -0.79
SNORD88A-201ENST00000408314 PHLPP2Q6ZVD8 1323 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 H3BQV1 296 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 FSCN2O14926 492 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 DTNBO60941 627 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ZC3H11AO75152 810 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 TBX10O75333 385 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 NR1I2O75469 434 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 CSDE1O75534 798 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 IL9P15248 144 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 HOXB8P17481 243 aaPredicted RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ATF7P17544 494 aaPredicted RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 U2AF2P26368 475 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ARL2P36404 184 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 TECP42680 631 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 COASYQ13057 564 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 PDIA5Q14554 519 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 SMAD2Q15796 467 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 DUSP6Q16828 381 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 RILPL1Q5EBL4 403 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 MRPL10Q7Z7H8 261 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ADHFE1Q8IWW8 467 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 SLC39A11Q8N1S5 342 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 CASP10Q92851 521 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 TMEM175Q9BSA9 504 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 TMEM60Q9H2L4 133 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms