RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PIGOQ8TEQ8 1089 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 TCP11Q8WWU5 503 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 ZNF558Q96NG5 402 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 FOXP1Q9H334 677 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 EPHX3Q9H6B9 360 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 AGPAT5Q9NUQ2 364 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 FAM105AQ9NUU6 356 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 PLCB3Q01970 1234 aa21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 SRGAP1Q7Z6B7 1085 aa21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 GJD3Q8N144 294 aa21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 FAM184AQ8NB25 1140 aa21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 MRPS27Q92552 414 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 ANKEF1Q9NU02 776 aa21.5■■□□□ 1.03
SMARCB1-204ENST00000407422 FSCN2O14926 492 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 GLP2RO95838 553 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 SPATA31C1P0DKV0 1188 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 HOXA11P31270 313 aaPredicted RBP21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 NDUFV1P49821 464 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 RBM10P98175 930 aaKnown RBP21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 TLE6Q9H808 572 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 CLEC1BQ9P126 229 aa21.49■■□□□ 1.03
SMARCB1-204ENST00000407422 ASAP2O43150 1006 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 ZNF623O75123 536 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 TECP42680 631 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 RARRES1P49788 294 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 MSLNLQ96KJ4 702 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 SPG21Q9NZD8 308 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 LZTS1Q9Y250 596 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 PCDHB2Q9Y5E7 798 aa21.48■■□□□ 1.03
SMARCB1-204ENST00000407422 NT5C1B-RDH14C9J2C7 533 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 MBTPS2O43462 519 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 SKIP12755 728 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 SSTR3P32745 418 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 NBR1Q14596 966 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 PLPP4Q5VZY2 271 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 CATSPER3Q86XQ3 398 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 NOSTRINQ8IVI9 506 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 ASAP3Q8TDY4 903 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 TCF25Q9BQ70 676 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 MRPL9Q9BYD2 267 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 PUF60Q9UHX1 559 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 CD207Q9UJ71 328 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 FAM50BQ9Y247 325 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 MED24O75448 989 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 OFD1O75665 1012 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 DGAT1O75907 488 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 OR52Z1P0C646 297 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 PPM1AP35813 382 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 RAB27AP51159 221 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 BCAR1P56945 870 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 GNL2Q13823 731 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 MXD4Q14582 209 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 RABEP1Q15276 862 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 TTC38Q5R3I4 469 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 UBXN11Q5T124 520 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 GLB1LQ6UWU2 654 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 SLC39A11Q8N1S5 342 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 VN1R2Q8NFZ6 395 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 CCDC43Q96MW1 224 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 BARX2Q9UMQ3 279 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 INPP5FQ9Y2H2 1132 aa21.47■■□□□ 1.03
SMARCB1-204ENST00000407422 HIDE1A8MVS5 230 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 ARL2P36404 184 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 PTENP60484 403 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 KRT17Q04695 432 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 ZP2Q05996 745 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 SMAD4Q13485 552 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 SMAD2Q15796 467 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 DUSP6Q16828 381 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 PDE12Q6L8Q7 609 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 AGMOQ6ZNB7 445 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 ENTPD7Q9NQZ7 604 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 TBC1D13Q9NVG8 400 aa21.46■■□□□ 1.03
SMARCB1-204ENST00000407422 USO1O60763 962 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 ZC3H11AO75152 810 aaKnown RBP eCLIP21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 ALDH7A1P49419 539 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 AFF1P51825 1210 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 CAPSQ13938 189 aa21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 NOMO2Q5JPE7 1267 aa21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 TMEM173Q86WV6 379 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 TUFT1Q9NNX1 390 aa21.45■■□□□ 1.02
SMARCB1-204ENST00000407422 TSPAN1O60635 241 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 CD2BP2O95400 341 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 GLRA2P23416 452 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 ORC2Q13416 577 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 POTEGQ6S5H5 508 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 MAEAQ7L5Y9 396 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 MRPL10Q7Z7H8 261 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 C4orf32Q8N8J7 132 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 C1QTNF1Q9BXJ1 281 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 POLR3FQ9H1D9 316 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 NRDE2Q9H7Z3 1164 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 GPRC5CQ9NQ84 441 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 PRKAG3Q9UGI9 489 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 INO80B-WBP1J3KQ70 363 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 B4GALT3O60512 393 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 ERLIN2O94905 339 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 EYA4O95677 639 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 U2AF2P26368 475 aaKnown RBP eCLIP21.44■■□□□ 1.023e-8■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms