RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 A0A1W2PRG0 241 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 C5orf60A6NFR6 353 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 H0YHG0 523 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 VIL1P09327 827 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 NUDT17P0C025 328 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 KIAA1755Q5JYT7 1200 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 PHLDB3Q6NSJ2 640 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 B3GNT9Q6UX72 402 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 SYCP3Q8IZU3 236 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 UBL4BQ8N7F7 174 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 CEP89Q96ST8 783 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 PSMD1Q99460 953 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ZNF577Q9BSK1 485 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TEKT3Q9BXF9 490 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TMEM206Q9H813 350 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 HERC5Q9UII4 1024 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 FOXN3O00409 490 aaPredicted RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ZBTB39O15060 712 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 GGPS1O95749 300 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TAL1P17542 331 aaPredicted RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 HNRNPH1P31943 449 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 CHRNA3P32297 505 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 MAGOHP61326 146 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ARHGAP44Q17R89 818 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 CROCCP2Q86T23 111 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 KSR1Q8IVT5 923 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 MAGOHBQ96A72 148 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 CENPTQ96BT3 561 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TLCD1Q96CP7 247 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 RPS6KC1Q96S38 1066 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ZDHHC18Q9NUE0 388 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ATP8A1Q9Y2Q0 1164 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 NR2E1Q9Y466 385 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 ALG6Q9Y672 507 aa11.61□□□□□ -0.55
CLIP4-204ENST00000404424 PODXLO00592 558 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 ECE2O60344 883 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 VCAM1P19320 739 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 JAG1P78504 1218 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 MAPK7Q13164 816 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 BYSLQ13895 437 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 FBXW10Q5XX13 1052 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CHURC1Q8WUH1 139 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CABS1Q96KC9 395 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 RIT2Q99578 217 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 UNC45AQ9H3U1 944 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 ACTR5Q9H9F9 607 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 TAS2R14Q9NYV8 317 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 LARSQ9P2J5 1176 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CNOT8Q9UFF9 292 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 LOXHD1Q8IVV2 1947 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 MAPK13O15264 365 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 PMM2O15305 246 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 HIP1RO75146 1068 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 PHF2O75151 1096 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 TMOD1P28289 359 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 GPC5P78333 572 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 ACTN3Q08043 901 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 IFT88Q13099 833 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 RNF187Q5TA31 235 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CCDC121Q6ZUS5 278 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 JAMLQ86YT9 394 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 RUNDC3BQ96NL0 473 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 LXNQ9BS40 222 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 PABPC3Q9H361 631 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 PCYOX1Q9UHG3 505 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
CLIP4-204ENST00000404424 COG5Q9UP83 839 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
CLIP4-204ENST00000404424 CCDC169A6NNP5 214 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 PLA2G6O60733 806 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 RTN2O75298 545 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 PMS2P54278 862 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 CC2D2BQ6DHV5 1058 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 RAPGEF5Q92565 580 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 ALG3Q92685 438 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 P3H4Q92791 437 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 PGM2Q96G03 612 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 TRIM31Q9BZY9 425 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms