RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SQORQ9Y6N5 450 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 K7ERI5 159 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 SLC16A4O15374 487 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 KIF20AO95235 890 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 CHRNA1P02708 482 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 CLTBP09497 229 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
LINC00339-201ENST00000404210 PPP1R2P41236 205 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 PHKA2P46019 1235 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 NLRP12P59046 1061 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00339-201ENST00000404210 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
LINC00339-201ENST00000404210 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 CDY2AQ9Y6F7 541 aa13.57□□□□□ -0.24
LINC00339-201ENST00000404210 K7ENM7 598 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 BIN1O00499 593 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00339-201ENST00000404210 PPP1R37O75864 691 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 GCNT3O95395 438 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
LINC00339-201ENST00000404210 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
LINC00339-201ENST00000404210 SELPP16109 830 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 BMP6P22004 513 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 ZSCAN23Q3MJ62 389 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 ZNF668Q96K58 619 aaPredicted RBP13.56□□□□□ -0.24
LINC00339-201ENST00000404210 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
LINC00339-201ENST00000404210 FZD8Q9H461 694 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
LINC00339-201ENST00000404210 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 MYBP10242 640 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 MAPK6Q16659 721 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 CT47A1Q5JQC4 288 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 PPP1R16BQ96T49 567 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 OSMRQ99650 979 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 KIFC3Q9BVG8 833 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 CCDC113Q9H0I3 377 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 HIPK3Q9H422 1215 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 TMEM206Q9H813 350 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 PRMT7Q9NVM4 692 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-201ENST00000404210 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 ADGRA3Q8IWK6 1321 aa13.55□□□□□ -0.24
LINC00339-201ENST00000404210 SYCE3A1L190 88 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 INO80B-WBP1J3KQ70 363 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 ACKR2O00590 384 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
LINC00339-201ENST00000404210 CTSHP09668 335 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 PRCPP42785 496 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 CASP5P51878 434 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 MBTD1Q05BQ5 628 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 STRN3Q13033 797 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 STIM1Q13586 685 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 ADSSL1Q8N142 457 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 GLIS3Q8NEA6 775 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-201ENST00000404210 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 MINDY3Q9H8M7 445 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 UBE4BO95155 1302 aa13.54□□□□□ -0.24
LINC00339-201ENST00000404210 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
LINC00339-201ENST00000404210 GPR182O15218 404 aa13.53□□□□□ -0.24
LINC00339-201ENST00000404210 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms