RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 MTRQ99707 1265 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 EPHX3Q9H6B9 360 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 FAM105AQ9NUU6 356 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 CLEC1BQ9P126 229 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 PRKAG3Q9UGI9 489 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 BARX2Q9UMQ3 279 aaPredicted RBP17.15■□□□□ 0.34
TPM1-207ENST00000403994 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 SRGAP2CP0DJJ0 459 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 MCM7P33993 719 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 TXKP42681 527 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 PLPP4Q5VZY2 271 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 SRGAP1Q7Z6B7 1085 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 TLE6Q9H808 572 aa17.14■□□□□ 0.33
TPM1-207ENST00000403994 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.33
TPM1-207ENST00000403994 SKIP12755 728 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 COL9A1P20849 921 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
TPM1-207ENST00000403994 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
TPM1-207ENST00000403994 DUSP6Q16828 381 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 PDE12Q6L8Q7 609 aaKnown RBP17.13■□□□□ 0.33
TPM1-207ENST00000403994 MICAL1Q8TDZ2 1067 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 CCDC43Q96MW1 224 aaKnown RBP17.13■□□□□ 0.33
TPM1-207ENST00000403994 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 ENTPD7Q9NQZ7 604 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 ANKEF1Q9NU02 776 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 SPG21Q9NZD8 308 aa17.13■□□□□ 0.33
TPM1-207ENST00000403994 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 PER2O15055 1255 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 ZNF623O75123 536 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 ZC3H11AO75152 810 aaKnown RBP eCLIP17.12■□□□□ 0.33
TPM1-207ENST00000403994 EYA4O95677 639 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
TPM1-207ENST00000403994 RARRES1P49788 294 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 COASYQ13057 564 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 GLB1LQ6UWU2 654 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 FBXO18Q8NFZ0 1043 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 ZSCAN31Q96LW9 406 aaPredicted RBP17.12■□□□□ 0.33
TPM1-207ENST00000403994 CDCA3Q99618 268 aaPredicted RBP17.12■□□□□ 0.33
TPM1-207ENST00000403994 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
TPM1-207ENST00000403994 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 WDFY4Q6ZS81 3184 aa17.12■□□□□ 0.33
TPM1-207ENST00000403994 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 HIDE1A8MVS5 230 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 PI4K2BG5E9Z4 385 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 ASAP2O43150 1006 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 DGAT1O75907 488 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 RBM25P49756 843 aaKnown RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 BCAR1P56945 870 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 CAPSQ13938 189 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 NOMO2Q5JPE7 1267 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 NOSTRINQ8IVI9 506 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 RAPGEFL1Q9UHV5 662 aa17.11■□□□□ 0.33
TPM1-207ENST00000403994 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
TPM1-207ENST00000403994 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 FAM86C2PA6NEL3 165 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 B4GALT3O60512 393 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 TSPAN1O60635 241 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 ERLIN2O94905 339 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 PTENP60484 403 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 KRT17Q04695 432 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
TPM1-207ENST00000403994 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 POP1Q99575 1024 aaKnown RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
TPM1-207ENST00000403994 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 MED24O75448 989 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 OFD1O75665 1012 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 ARL2P36404 184 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 KCNC3Q14003 757 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 TFDP1Q14186 410 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
TPM1-207ENST00000403994 PCBP1Q15365 356 aaKnown RBP eCLIP17.09■□□□□ 0.334e-6■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms