RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 RHBDL3P58872 404 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 PPP4CP60510 307 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 KYNUQ16719 465 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 COBLL1Q53SF7 1204 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 PRUNE1Q86TP1 453 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 EIF2AK1Q9BQI3 630 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 AGAP1Q9UPQ3 857 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 PCDHAC2Q9Y5I4 1007 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 TMEM120BA0PK00 339 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 CLDN3O15551 220 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 FMO5P49326 533 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 EIF3BP55884 814 aaKnown RBP9.88□□□□□ -0.83
HPS4-203ENST00000402105 MAPK7Q13164 816 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 NARFQ9UHQ1 456 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 GH1P01241 217 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 PYGMP11217 842 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 GCFC2P16383 781 aaKnown RBP9.88□□□□□ -0.83
HPS4-203ENST00000402105 DLG4P78352 724 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 ZNF449Q6P9G9 518 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SLFN12Q8IYM2 578 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 HES6Q96HZ4 224 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 MTUS1Q9ULD2 1270 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 ASTN1O14525 1302 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 PDXKO00764 312 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SPAG7O75391 227 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 KRT5P13647 590 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 ADCY8P40145 1251 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SESN3P58005 492 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 PTENP60484 403 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 DRP2Q13474 957 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 PPP4R3CPQ6ZMV5 832 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 TAOK1Q7L7X3 1001 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 GSTA5Q7RTV2 222 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 AGAP11Q8TF27 550 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 MIEF2Q96C03 454 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SPDL1Q96EA4 605 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 C9orf72Q96LT7 481 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 SIX2Q9NPC8 291 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
HPS4-203ENST00000402105 MYH3P11055 1940 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 KIAA0391O15091 583 aaKnown RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 THAP12O43422 761 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 TM4SF1P30408 202 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 RNASELQ05823 741 aaKnown RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 TTC27Q6P3X3 843 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 VSIG1Q86XK7 387 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-203ENST00000402105 CACNA1SQ13698 1873 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 ENO4A6NNW6 628 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 POC1B-GALNT4F8VUJ3 575 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 CYP26A1O43174 497 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 PIAS1O75925 651 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 SPATA31C1P0DKV0 1188 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 BRAFP15056 766 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 ALDH5A1P51649 535 aaPredicted RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 PLCB4Q15147 1175 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 LRCH2Q5VUJ6 765 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 SYT2Q8N9I0 419 aaPredicted RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 ZNF653Q96CK0 615 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 ZC3H12CQ9C0D7 883 aaKnown RBP9.87□□□□□ -0.83
HPS4-203ENST00000402105 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 POLLQ9UGP5 575 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 EMSYQ7Z589 1322 aa9.87□□□□□ -0.83
HPS4-203ENST00000402105 WDR91A4D1P6 747 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 K7ENM7 598 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 MSH4O15457 936 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 TGFB1I1O43294 461 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 PPFIA2O75334 1257 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 SLC10A5Q5PT55 438 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 DUPD1Q68J44 220 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
HPS4-203ENST00000402105 PHLDB3Q6NSJ2 640 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 RINT1Q6NUQ1 792 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 PRELID2Q8N945 189 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.838e-7■□□□□ 8.8
HPS4-203ENST00000402105 P2RX7Q99572 595 aaKnown RBP9.86□□□□□ -0.83
HPS4-203ENST00000402105 AGPAT1Q99943 283 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 STK33Q9BYT3 514 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 PARVGQ9HBI0 331 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 PARP4Q9UKK3 1724 aaKnown RBP9.86□□□□□ -0.83
HPS4-203ENST00000402105 ADAMTSL3P82987 1691 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 SORBS3O60504 671 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 GAS7O60861 476 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 SUN1O94901 812 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 SGPL1O95470 568 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 TMEM253P0C7T8 217 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 ADCY2Q08462 1091 aa9.86□□□□□ -0.83
HPS4-203ENST00000402105 CETN1Q12798 172 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms