RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ZSCAN31Q96LW9 406 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TTPALQ9BTX7 342 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 APOL5Q9BWW9 433 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 SMOC1Q9H4F8 434 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ABCB6Q9NP58 842 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 GPRC5BQ9NZH0 403 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 FAM198AQ9UFP1 575 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 C19orf53Q9UNZ5 99 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 MAP3K19Q56UN5 1328 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NCAPD2Q15021 1401 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ANKRD31Q8N7Z5 1873 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ARFGEF2Q9Y6D5 1785 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TBKBP1A7MCY6 615 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TISP43B9A030 160 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 B9A039 149 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 POLR3GO15318 223 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 GREM1O60565 184 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TSC22D2O75157 780 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 USP1O94782 785 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PRKD3O94806 890 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CAPN2P17655 700 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ABCB4P21439 1286 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 USP8P40818 1118 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NLRP5P59047 1200 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PRKG1Q13976 671 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 LLGL1Q15334 1064 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ANO4Q32M45 955 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 MAJINQ3KP22 176 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 SEZ6Q53EL9 994 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC183Q5T5S1 534 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 FOXB2Q5VYV0 432 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 OLFML1Q6UWY5 402 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 LPCAT2Q7L5N7 544 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NLRP10Q86W26 655 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 FAM178BQ8IXR5 827 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 AVL9Q8NBF6 648 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 GOLM1Q8NBJ4 401 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 GOT1L1Q8NHS2 421 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 DIS3LQ8TF46 1054 aaKnown RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC74AQ96AQ1 378 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CDCA7LQ96GN5 454 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PPP1R9BQ96SB3 815 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PPP1R16BQ96T49 567 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TREX2Q9BQ50 279 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 EDEM3Q9BZQ6 932 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 LRRCC1Q9C099 1032 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TMEM134Q9H6X4 195 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 MRPL11Q9Y3B7 192 aaKnown RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF711Q9Y462 761 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 EYSQ5T1H1 3165 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 AP3B1O00203 1094 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 CACNB4O00305 520 aaPredicted RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 CAPN9O14815 690 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 MCF2LO15068 1137 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 CYP27B1O15528 508 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 STX6O43752 255 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SOCS5O75159 536 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 PDHA1P08559 390 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 DHRS4L1P0CG22 281 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 TOP1P11387 765 aaKnown RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 HDCP19113 662 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 LIFRP42702 1097 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.721e-6■■■□□ 15.9
CLHC1-201ENST00000401408 PSMC4P43686 418 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 GPR85P60893 370 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 DDR1Q08345 913 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 TRDNQ13061 729 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 MBTPS1Q14703 1052 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SMAD1Q15797 465 aaKnown RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 HABP4Q5JVS0 413 aaKnown RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SNAP47Q5SQN1 464 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 C6orf132Q5T0Z8 1188 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 IFIT1BQ5T764 474 aaKnown RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC84Q86UT8 332 aaPredicted RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 PPFIBP1Q86W92 1011 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 LDHDQ86WU2 507 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SLITRK4Q8IW52 837 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 GALNT12Q8IXK2 581 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 OR2C3Q8N628 320 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 PPM1NQ8N819 430 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 FAM184AQ8NB25 1140 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 ZSCAN1Q8NBB4 408 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF280CQ8ND82 737 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 FAM156AQ8NDB6 213 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SLC35G2Q8TBE7 412 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 ASB12Q8WXK4 309 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SHC3Q92529 594 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 KIAA1191Q96A73 305 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 EXOC2Q96KP1 924 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 RIPOR3Q96MK2 946 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 SLC4A9Q96Q91 983 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 TAAR9Q96RI9 348 aa4.3□□□□□ -1.72
CLHC1-201ENST00000401408 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
CLHC1-201ENST00000401408 STK31Q9BXU1 1019 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms