RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
LINC00544-201ENST00000400540 MTHFRP42898 656 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 SLC11A1P49279 550 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 XKR3Q5GH77 459 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 ANO5Q75V66 913 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
LINC00544-201ENST00000400540 ZNF280BQ86YH2 543 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
LINC00544-201ENST00000400540 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 SLC22A17Q8WUG5 538 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
LINC00544-201ENST00000400540 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 DDX11L8A8MPP1 907 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 M0R2N6 131 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 SLC37A4O43826 429 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 OFD1O75665 1012 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 GALTP07902 379 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 NPY5RQ15761 445 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 GLB1LQ6UWU2 654 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 TMC5Q6UXY8 1006 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 UBALD2Q8IYN6 164 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 RDM1Q8NG50 284 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 TRAIPQ9BWF2 469 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
LINC00544-201ENST00000400540 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 DMXL1Q9Y485 3027 aa13.39□□□□□ -0.27
LINC00544-201ENST00000400540 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 EML1O00423 815 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 DDHD2O94830 711 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 CYP3A7P24462 503 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 DNM2P50570 870 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 POLGP54098 1239 aaPredicted RBP13.38□□□□□ -0.27
LINC00544-201ENST00000400540 NPEPPSP55786 919 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 EVCP57679 992 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 RNASELQ05823 741 aaKnown RBP13.38□□□□□ -0.27
LINC00544-201ENST00000400540 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
LINC00544-201ENST00000400540 AGMOQ6ZNB7 445 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 TMEM87AQ8NBN3 555 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
LINC00544-201ENST00000400540 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
LINC00544-201ENST00000400540 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
LINC00544-201ENST00000400540 DNAH14Q0VDD8 3507 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
LINC00544-201ENST00000400540 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
LINC00544-201ENST00000400540 ATAT1Q5SQI0 421 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 CWF19L1Q69YN2 538 aaKnown RBP13.37□□□□□ -0.27
LINC00544-201ENST00000400540 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 CABP7Q86V35 215 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 BLIDQ8IZY5 108 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 SNX27Q96L92 541 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 PCDHB2Q9Y5E7 798 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
LINC00544-201ENST00000400540 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 DTNBO60941 627 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 ZNF623O75123 536 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 SKIP12755 728 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 RAB27AP51159 221 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 CLCN4P51793 760 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 PSMC5P62195 406 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 GIT2Q14161 759 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 INF2Q27J81 1249 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
LINC00544-201ENST00000400540 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 TMEM143Q96AN5 459 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
LINC00544-201ENST00000400540 SFXN1Q9H9B4 322 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 CYP26B1Q9NR63 512 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 DDX25Q9UHL0 483 aaKnown RBP13.36□□□□□ -0.27
LINC00544-201ENST00000400540 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms