RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 FSCBQ5H9T9 825 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 RNF217Q8TC41 542 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 GANCQ8TET4 914 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 RNF25Q96BH1 459 aaPredicted RBP19.73■□□□□ 0.75
USP25-204ENST00000400183 NKX1-1Q15270 411 aaPredicted RBP19.73■□□□□ 0.75
USP25-204ENST00000400183 NAALADL2Q58DX5 795 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 FRA10AC1Q70Z53 315 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 BRINP3Q76B58 766 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 NUP85Q9BW27 656 aa19.73■□□□□ 0.75
USP25-204ENST00000400183 INTS2Q9H0H0 1204 aaKnown RBP19.73■□□□□ 0.75
USP25-204ENST00000400183 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
USP25-204ENST00000400183 MORC2Q9Y6X9 1032 aaPredicted RBP19.73■□□□□ 0.75
USP25-204ENST00000400183 STAT3P40763 770 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 DRP2Q13474 957 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 SWSAP1Q6NVH7 229 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 TBC1D1Q86TI0 1168 aaPredicted RBP19.72■□□□□ 0.75
USP25-204ENST00000400183 PIP4K2CQ8TBX8 421 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 INTUQ9ULD6 942 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 CPDO75976 1380 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 PDCLQ13371 301 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 LCA5Q86VQ0 697 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 M0QYV0 167 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 FDX1P10109 184 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 KIAA1755Q5JYT7 1200 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 ENOSF1Q7L5Y1 443 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 TMEM247A6NEH6 219 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 SPP2Q13103 211 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 EDEM3Q9BZQ6 932 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 IP6K2Q9UHH9 426 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 PI4K2BG5E9Z4 385 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 SNX2O60749 519 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 GNA15P30679 374 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 MORC4Q8TE76 937 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 IFT43Q96FT9 208 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 HPCAL4Q9UM19 191 aa19.72■□□□□ 0.75
USP25-204ENST00000400183 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.72■□□□□ 0.75
USP25-204ENST00000400183 SMARCA1P28370 1054 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 CHRNA3P32297 505 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 PSMC1P62191 440 aaKnown RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 DEUP1Q05D60 604 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ACAD11Q709F0 780 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 EPM2AIP1Q7L775 607 aaPredicted RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 SYNE4Q8N205 404 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ACAP3Q96P50 834 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 MRPL4Q9BYD3 311 aaKnown RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 VPS11Q9H270 941 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 GSG1L2A8MUP6 293 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 C1orf228Q6PIY5 440 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 RHPN2Q8IUC4 686 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 LXNQ9BS40 222 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 TMEM60Q9H2L4 133 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 SUDS3Q9H7L9 328 aaPredicted RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 PRR29P0C7W0 189 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ATXN8OSP0DMR3 200 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 MYBL1P10243 752 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 IFNA8P32881 189 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 USP11P51784 963 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ANGPTL8Q6UXH0 198 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ADGRF4Q8IZF3 695 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 POLD4Q9HCU8 107 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 POLIQ9UNA4 740 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 GRID2IPA4D2P6 1211 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 GYG2O15488 501 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 FTLP02792 175 aaPredicted RBP19.71■□□□□ 0.75
USP25-204ENST00000400183 TRIM72Q6ZMU5 477 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 FAM47EQ6ZV65 393 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 OSBPL9Q96SU4 736 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 ZBED2Q9BTP6 218 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 PCSK1NQ9UHG2 260 aa19.71■□□□□ 0.75
USP25-204ENST00000400183 PFDN1O60925 122 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 SPAG7O75391 227 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 TADA3O75528 432 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 COPS2P61201 443 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 HDLBPQ00341 1268 aaKnown RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 NEDD1Q8NHV4 660 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 TTC7AQ9ULT0 858 aaPredicted RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 ORC4O43929 436 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 PYGBP11216 843 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 PMS2P54278 862 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.7■□□□□ 0.744e-7■■■■□ 20.4
USP25-204ENST00000400183 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 POLR3FQ9H1D9 316 aaPredicted RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 ZCCHC17Q9NP64 241 aaKnown RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 ATP5HO75947 161 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 HEATR6Q6AI08 1181 aaKnown RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 ANLNQ9NQW6 1124 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 LMNAP02545 664 aaKnown RBP19.7■□□□□ 0.74
USP25-204ENST00000400183 ACAD9Q9H845 621 aa19.7■□□□□ 0.74
USP25-204ENST00000400183 TTC26A0AVF1 554 aa19.69■□□□□ 0.74
USP25-204ENST00000400183 GOLGA8MH3BSY2 632 aa19.69■□□□□ 0.74
USP25-204ENST00000400183 CYP19A1P11511 503 aaPredicted RBP19.69■□□□□ 0.74
USP25-204ENST00000400183 ZNF211Q13398 564 aaPredicted RBP19.69■□□□□ 0.74
USP25-204ENST00000400183 CREB3O43889 395 aa19.69■□□□□ 0.74
USP25-204ENST00000400183 NSUN2Q08J23 767 aaKnown RBP eCLIP19.69■□□□□ 0.74
USP25-204ENST00000400183 APOBEC3FQ8IUX4 373 aaKnown RBP19.69■□□□□ 0.74
USP25-204ENST00000400183 RHOT1Q8IXI2 618 aa19.69■□□□□ 0.74
USP25-204ENST00000400183 THOC1Q96FV9 657 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms