RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 STAG1Q8WVM7 1258 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 CHAMP1Q96JM3 812 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 JCADQ9P266 1359 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 ZBED1O96006 694 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 ITGA4P13612 1032 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 EPHX2P34913 555 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 NLRP12P59046 1061 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 SH3RF3Q8TEJ3 882 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 CFAP74Q9C0B2 1584 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 INAQ16352 499 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 NAA35Q5VZE5 725 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 CROCCP2Q86T23 111 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 TBCKQ8TEA7 893 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 HTATIP2Q9BUP3 242 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 DPH5Q9H2P9 285 aa11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
CACNA1C-216ENST00000399638 A8MXQ7 604 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 SP100P23497 879 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 DNAJB2P25686 324 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 AMPD2Q01433 879 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 MORC3Q14149 939 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 PUS3Q9BZE2 481 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 ABCA8O94911 1581 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 CFLARO15519 480 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 ATP5JP18859 108 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 GRK2P25098 689 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 RRM2BQ7LG56 351 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 CYTH2Q99418 400 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 FAM217BQ9NTX9 383 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 SOS2Q07890 1332 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 MED14O60244 1454 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 EEF1GP26641 437 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 PSMC5P62195 406 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 AP1B1Q10567 949 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 LLGL1Q15334 1064 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 TOMM20Q15388 145 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 SCG3Q8WXD2 468 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 ERLEC1Q96DZ1 483 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 KCNJ18B7U540 433 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 CAND2O75155 1236 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 TAC1P20366 129 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 GMPSP49915 693 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 POLE2P56282 527 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 KCNJ12Q14500 433 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 IL31Q6EBC2 164 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 FAM81BQ96LP2 452 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 GH1P01241 217 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 BFSP2Q13515 415 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 LRRC41Q15345 812 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 BZW1Q7L1Q6 419 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 C17orf53Q8N3J3 647 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 CEP70Q8NHQ1 597 aa11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 TSEN34Q9BSV6 310 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-216ENST00000399638 ZNF197O14709 1029 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 NR2F2P24468 414 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 C16orf87Q6PH81 154 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 KDELC2Q7Z4H8 507 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PIGBQ92521 554 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SPATA16Q9BXB7 569 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PARVGQ9HBI0 331 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 RGS16O15492 202 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 ARHGEF9O43307 516 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 KDM1AO60341 852 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 ERVK-10P10266 1014 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 KCNB1Q14721 858 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 CATSPER3Q86XQ3 398 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 KRT87PA6NCN2 255 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms