RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 DRAXINQ8NBI3 349 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 ASB12Q8WXK4 309 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 C8orf76Q96K31 380 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 TBCBQ99426 244 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 MENTQ9BUN1 341 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 NUCKS1Q9H1E3 243 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 NSMCE4AQ9NXX6 385 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 TACC3Q9Y6A5 838 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
TRAPPC13-202ENST00000399438 BTAF1O14981 1849 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 NEDD4P46934 1319 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF831Q5JPB2 1677 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 MT-CO1P00395 513 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 KLRK1P26718 216 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 GUCY1A2P33402 732 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PPM1AP35813 382 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 RECQLP46063 649 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 NDUFA8P51970 172 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PPP2R3AQ06190 1150 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 STK38Q15208 465 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 MMEL1Q495T6 779 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 KDELC2Q7Z4H8 507 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 AOPEPQ8N6M6 819 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 NACC2Q96BF6 587 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PPP1R16BQ96T49 567 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TTC1Q99614 292 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TCHPQ9BT92 498 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 GPRC5BQ9NZH0 403 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 USP27XA6NNY8 438 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 SLC7A4O43246 635 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PFKFB2O60825 505 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PAPLNO95428 1278 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 NPTXRO95502 500 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 POU2F2P09086 479 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 RBM5P52756 815 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 CTSWP56202 376 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 AKAP17AQ02040 695 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 NSUN2Q08J23 767 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 AP1B1Q10567 949 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 KRT32Q14532 448 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TNIP1Q15025 636 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 CTC1Q2NKJ3 1217 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 MUM1L1Q5H9M0 696 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 OR2C3Q8N628 320 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 ANKRD52Q8NB46 1076 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TDRD7Q8NHU6 1098 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 C17orf50Q8WW18 174 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 TRIM63Q969Q1 353 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 CNDP2Q96KP4 475 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 PCDHA7Q9UN72 937 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 DUSP12Q9UNI6 340 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 KCNH4Q9UQ05 1017 aa6.81□□□□□ -1.32
TRAPPC13-202ENST00000399438 FOXN1O15353 648 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 E2F6O75461 281 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TPM3P06753 285 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PDE6AP16499 860 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 IL1RL1Q01638 556 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF827Q17R98 1081 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 DNAJB7Q7Z6W7 309 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 GRAMD1CQ8IYS0 662 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PPP1R14CQ8TAE6 165 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 KIAA1191Q96A73 305 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 AIDAQ96BJ3 306 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FAM81BQ96LP2 452 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 SCAND2PQ9GZW5 306 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 NIP7Q9Y221 180 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PCDHGB6Q9Y5F9 930 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PCDHGB5Q9Y5G0 923 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TJP1Q07157 1748 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 MAP3K15Q6ZN16 1313 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CARMIL3Q8ND23 1372 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 SYNJ2BP-COX16A0A087WUM0 186 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FAM205CA6NFA0 338 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 BECN2A8MW95 431 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 GOSR1O95249 250 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CYP19A1P11511 503 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CASP1P29466 404 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ADH7P40394 386 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 MXI1P50539 228 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TNFAIP2Q03169 654 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 GRIN1Q05586 938 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 DPCR1Q3MIW9 517 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 LIN54Q6MZP7 749 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FAM156AQ8NDB6 213 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 HSPBAP1Q96EW2 488 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TREX2Q9BQ50 279 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TRIT1Q9H3H1 467 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CLSTN2Q9H4D0 955 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TFCP2L1Q9NZI6 479 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TMOD4Q9NZQ9 345 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 C19orf53Q9UNZ5 99 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 POLHQ9Y253 713 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms