RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 UGCGQ16739 394 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 KRT40Q6A162 431 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 EFCAB12Q6NXP0 572 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 B3GNT9Q6UX72 402 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 FAM43BQ6ZT52 329 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 EPOPA6NHQ4 379 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 BMP2P12643 396 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 CRYBB1P53674 252 aaPredicted RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 PRKCEQ02156 737 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 SPRED2Q7Z698 418 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 DIS3L2Q8IYB7 885 aaKnown RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 LRRN4Q8WUT4 740 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 TNFRSF25Q93038 417 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 NIFKQ9BYG3 293 aaKnown RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 KDM4CQ9H3R0 1056 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 SUGCTQ9HAC7 445 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 KCNMB3Q9NPA1 279 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 SH2B1Q9NRF2 756 aaPredicted RBP13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
SMIM11A-201ENST00000399292 GPR182O15218 404 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 RPS6KA5O75582 802 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 VTNP04004 478 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 LORP23490 312 aaPredicted RBP13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 PSMC5P62195 406 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 TBC1D8BQ0IIM8 1120 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 GRB10Q13322 594 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 HAS1Q92839 578 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 C17orf80Q9BSJ5 609 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 FKBPLQ9UIM3 349 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 AKT3Q9Y243 479 aa13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-201ENST00000399292 EML1O00423 815 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 GPR32O75388 356 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 QARSP47897 775 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 CLCN3P51790 818 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 RABEP1Q15276 862 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 TARBP2Q15633 366 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 MTERF2Q49AM1 385 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 LRRC71Q8N4P6 559 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 C8orf76Q96K31 380 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 SAMD11Q96NU1 681 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 OSMRQ99650 979 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 ERVK-5Q9HDB9 667 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
SMIM11A-201ENST00000399292 GBF1Q92538 1859 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 FAM181BA6NEQ2 426 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 LPXNO60711 386 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 STBD1O95210 358 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 STAG3L1P0CL83 205 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 DNM2P50570 870 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 CDC42EP1Q00587 391 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 EPHA7Q15375 998 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 CALCRLQ16602 461 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 EPC2Q52LR7 807 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 LINC01465Q8N7H1 131 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 TMEM40Q8WWA1 233 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 LINC01599Q8WXQ3 324 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 ARHGAP9Q9BRR9 750 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 ADAMTS10Q9H324 1103 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 LRFN2Q9ULH4 789 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
SMIM11A-201ENST00000399292 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 TMEM150BA6NC51 233 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 DGKIO75912 1065 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms