RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AUHQ13825 339 aaKnown RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 LRCH2Q5VUJ6 765 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 TTC27Q6P3X3 843 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 EPM2AIP1Q7L775 607 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 ARHGEF1Q92888 912 aaKnown RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 ZNF570Q96NI8 536 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 CCDC134Q9H6E4 229 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 METTL14Q9HCE5 456 aaKnown RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 DNAJC12Q9UKB3 198 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 DIS3Q9Y2L1 958 aaKnown RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 USP17L10C9JJH3 530 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 RIPK2O43353 540 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 PHF2O75151 1096 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 BZW1Q7L1Q6 419 aaKnown RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 KRT35Q92764 455 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 TYW1Q9NV66 732 aaKnown RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 NOP53Q9NZM5 478 aaKnown RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 USP15Q9Y4E8 981 aaPredicted RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 SFI1A8K8P3 1242 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 FOXO6A8MYZ6 492 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 KRT16P08779 473 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 AKR1B1P15121 316 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 PDE6CP51160 858 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 CCHCR1Q8TD31 782 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 CHORDC1Q9UHD1 332 aaPredicted RBP15.09■□□□□ 0.01
APOB-202ENST00000399256 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
APOB-202ENST00000399256 CREB1P16220 341 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 RPL13P26373 211 aaKnown RBP15.08■□□□□ 0.01
APOB-202ENST00000399256 CCNHP51946 323 aaPredicted RBP15.08■□□□□ 0.01
APOB-202ENST00000399256 ARHGAP44Q17R89 818 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 LONRF1Q17RB8 773 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 KCTD1Q719H9 257 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 EXOC3L1Q86VI1 746 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 KLHL29Q96CT2 875 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 TRIM33Q9UPN9 1127 aa15.08■□□□□ 0.01
APOB-202ENST00000399256 TNFAIP3P21580 790 aa15.08■□□□□ 0
APOB-202ENST00000399256 CYP4A11Q02928 519 aa15.08■□□□□ 0
APOB-202ENST00000399256 PPP1R18Q6NYC8 613 aa15.08■□□□□ 0
APOB-202ENST00000399256 ANKRD42Q8N9B4 389 aa15.08■□□□□ 0
APOB-202ENST00000399256 SPDL1Q96EA4 605 aa15.08■□□□□ 0
APOB-202ENST00000399256 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
APOB-202ENST00000399256 ALG6Q9Y672 507 aa15.08■□□□□ 0
APOB-202ENST00000399256 PLSCR1O15162 318 aa15.08■□□□□ 0
APOB-202ENST00000399256 OAS1P00973 400 aaKnown RBP15.08■□□□□ 0
APOB-202ENST00000399256 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
APOB-202ENST00000399256 ZNF543Q08ER8 600 aa15.08■□□□□ 0
APOB-202ENST00000399256 PICALMQ13492 652 aa15.08■□□□□ 0
APOB-202ENST00000399256 ZKSCAN8Q15776 578 aaPredicted RBP15.08■□□□□ 0
APOB-202ENST00000399256 NUGGCQ68CJ6 796 aa15.08■□□□□ 0
APOB-202ENST00000399256 CCDC137Q6PK04 289 aaKnown RBP15.08■□□□□ 0
APOB-202ENST00000399256 TAOK1Q7L7X3 1001 aa15.08■□□□□ 0
APOB-202ENST00000399256 ERICH1Q86X53 443 aa15.08■□□□□ 0
APOB-202ENST00000399256 TBC1D22AQ8WUA7 517 aa15.08■□□□□ 0
APOB-202ENST00000399256 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0
APOB-202ENST00000399256 DNM3Q9UQ16 869 aa15.08■□□□□ 0
APOB-202ENST00000399256 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
APOB-202ENST00000399256 SLC16A3O15427 465 aaKnown RBP15.07■□□□□ 0
APOB-202ENST00000399256 RAD21O60216 631 aa15.07■□□□□ 0
APOB-202ENST00000399256 LRRN2O75325 713 aa15.07■□□□□ 0
APOB-202ENST00000399256 NOVP48745 357 aa15.07■□□□□ 0
APOB-202ENST00000399256 DRG2P55039 364 aaKnown RBP15.07■□□□□ 0
APOB-202ENST00000399256 SATB1Q01826 763 aa15.07■□□□□ 0
APOB-202ENST00000399256 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
APOB-202ENST00000399256 FAM186BQ8IYM0 893 aa15.07■□□□□ 0
APOB-202ENST00000399256 GDAP1Q8TB36 358 aa15.07■□□□□ 0
APOB-202ENST00000399256 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
APOB-202ENST00000399256 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
APOB-202ENST00000399256 STK33Q9BYT3 514 aa15.07■□□□□ 0
APOB-202ENST00000399256 STMN4Q9H169 189 aaPredicted RBP15.07■□□□□ 0
APOB-202ENST00000399256 USP40Q9NVE5 1235 aa15.07■□□□□ 0
APOB-202ENST00000399256 TCRBV7S2A1N4TA0A589 114 aa15.07■□□□□ 0
APOB-202ENST00000399256 APBA3O96018 575 aa15.07■□□□□ 0
APOB-202ENST00000399256 ALADP13716 330 aa15.07■□□□□ 0
APOB-202ENST00000399256 CHRNA3P32297 505 aa15.07■□□□□ 0
APOB-202ENST00000399256 COPS2P61201 443 aa15.07■□□□□ 0
APOB-202ENST00000399256 PRR16Q569H4 304 aa15.07■□□□□ 0
APOB-202ENST00000399256 KSR1Q8IVT5 923 aa15.07■□□□□ 0
APOB-202ENST00000399256 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
APOB-202ENST00000399256 GPR88Q9GZN0 384 aa15.07■□□□□ 0
APOB-202ENST00000399256 CTTNBP2NLQ9P2B4 639 aa15.07■□□□□ 0
APOB-202ENST00000399256 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
APOB-202ENST00000399256 TMEM120BA0PK00 339 aa15.06■□□□□ 0
APOB-202ENST00000399256 PPP1R12AO14974 1030 aaPredicted RBP15.06■□□□□ 0
APOB-202ENST00000399256 SNHG28P0DPA3 235 aa15.06■□□□□ 0
APOB-202ENST00000399256 GCKP35557 465 aa15.06■□□□□ 0
APOB-202ENST00000399256 KCNJ1P48048 391 aa15.06■□□□□ 0
APOB-202ENST00000399256 NFIXQ14938 502 aa15.06■□□□□ 0
APOB-202ENST00000399256 LLGL1Q15334 1064 aa15.06■□□□□ 0
APOB-202ENST00000399256 GALNTL6Q49A17 601 aa15.06■□□□□ 0
APOB-202ENST00000399256 SETDB2Q96T68 719 aa15.06■□□□□ 0
APOB-202ENST00000399256 BCS1LQ9Y276 419 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms