RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TEX9Q8N6V9 391 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 PGBD1Q96JS3 809 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 NXF1Q9UBU9 619 aaKnown RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 PDXKO00764 312 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 SORBS3O60504 671 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 GFAPP14136 432 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 CRKP46108 304 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 PSMC5P62195 406 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 MAPK6Q16659 721 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 AGBL2Q5U5Z8 902 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 RCOR2Q8IZ40 523 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 CXorf38Q8TB03 319 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 SH3RF3Q8TEJ3 882 aaPredicted RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 TSC22D3Q99576 134 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 TBX3O15119 743 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 C4orf50Q6ZRC1 276 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 TRMT10CQ7L0Y3 403 aaKnown RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 MCUQ8NE86 351 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 NSUN6Q8TEA1 469 aaKnown RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 ABCA9Q8IUA7 1624 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 CLDN3O15551 220 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 KCNA4P22459 653 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 GGCXP38435 758 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 PRCPP42785 496 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 EFNA5P52803 228 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 PEX3P56589 373 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 SUSD4Q5VX71 490 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 ANO5Q75V66 913 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 HOMEZQ8IX15 550 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 RIBC1Q8N443 379 aaPredicted RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 N4BP2L2Q92802 583 aaPredicted RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 MAP3K14Q99558 947 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 BHMT2Q9H2M3 363 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 XAB2Q9HCS7 855 aaKnown RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 STX18Q9P2W9 335 aaKnown RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 CYP2E1P05181 493 aaPredicted RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 EFTUD2Q15029 972 aaKnown RBP eCLIP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 DALRD3Q5D0E6 543 aaKnown RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 ARHGAP27Q6ZUM4 889 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 ALKBH8Q96BT7 664 aaKnown RBP8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 DYNLL2Q96FJ2 89 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 ZNF560Q96MR9 790 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT82Q9NSB4 513 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 TBK1Q9UHD2 729 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 SNX5Q9Y5X3 404 aa8.9□□□□□ -0.99
SPTLC3-201ENST00000399002 PIK3R2O00459 728 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC7A5Q01650 507 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 OCRLQ01968 901 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 MED21Q13503 144 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SLC27A3Q5K4L6 730 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 HIBCHQ6NVY1 386 aaPredicted RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CYB5R4Q7L1T6 521 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 GTF3C2Q8WUA4 911 aaPredicted RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT35Q92764 455 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CHMP6Q96FZ7 201 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 TMEM47Q9BQJ4 181 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 ECT2Q9H8V3 914 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 KLHL8Q9P2G9 620 aaPredicted RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 COBLO75128 1261 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SPAG6O75602 509 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 ZMYND10O75800 440 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 EYA4O95677 639 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CD58P19256 250 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SLCO1A2P46721 670 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SERPINB9P50453 376 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 UBXN2AP68543 259 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 PARP9Q8IXQ6 854 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SPICE1Q8N0Z3 855 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 FRMD8P1Q9BZ68 369 aaPredicted RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 WDR35Q9P2L0 1181 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 UVRAGQ9P2Y5 699 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CREB3O43889 395 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 HUS1O60921 280 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT14P02533 472 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 QARSP47897 775 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 EPHA7Q15375 998 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 C3orf20Q8ND61 904 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 OR6B3Q8NGW1 331 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CMTM5Q96DZ9 223 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 PDLIM2Q96JY6 352 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 ELAC2Q9BQ52 826 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 ADGRG1Q9Y653 693 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 CLRN2A0PK11 232 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 APOL1O14791 398 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 KIF1CO43896 1103 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 EEF1B2P24534 225 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 GNA15P30679 374 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 SDC4P31431 198 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 TRIP13Q15645 432 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms