RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 MUTP22033 750 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 UBXN2AP68543 259 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 PALB2Q86YC2 1186 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 CCDC125Q86Z20 511 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 TEX2Q8IWB9 1127 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 OGFOD1Q8N543 542 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 KCND2Q9NZV8 630 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 ZNRF3Q9ULT6 936 aa27.7■■■□□ 2.02
COL13A1-203ENST00000398969 KIF22Q14807 665 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 ARHGAP44Q17R89 818 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 YTHDF3Q7Z739 585 aaKnown RBP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 BCCIPQ9P287 314 aaKnown RBP eCLIP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 SYNPO2Q9UMS6 1093 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 DAAM1Q9Y4D1 1078 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 COL2A1P02458 1487 aaPredicted RBP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 POLR2MP0CAP2 368 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 ECE1P42892 770 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 BFSP1Q12934 665 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 TRAF1Q13077 416 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 PRPF4BQ13523 1007 aaKnown RBP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 ICE2Q659A1 982 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 PHLDB3Q6NSJ2 640 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 CSRNP1Q96S65 589 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 RAB17Q9H0T7 212 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 PPANQ9NQ55 473 aaKnown RBP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 SEPT11Q9NVA2 429 aaKnown RBP27.69■■■□□ 2.02
COL13A1-203ENST00000398969 TMOD2Q9NZR1 351 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 COG5Q9UP83 839 aa27.69■■■□□ 2.02
COL13A1-203ENST00000398969 ANKRD62A6NC57 917 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 DLGAP5Q15398 846 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 KIAA1755Q5JYT7 1200 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 NIM1KQ8IY84 436 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 BANK1Q8NDB2 785 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 TRIM31Q9BZY9 425 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 UNC45AQ9H3U1 944 aa27.68■■■□□ 2.02
COL13A1-203ENST00000398969 FAM170AA1A519 330 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 CEP55Q53EZ4 464 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 MMS22LQ6ZRQ5 1243 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 SLC9A9Q8IVB4 645 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 LMO3Q8TAP4 145 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 NAP1L3Q99457 506 aaPredicted RBP27.67■■■□□ 2.02
COL13A1-203ENST00000398969 STRA6Q9BX79 667 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 GGA2Q9UJY4 613 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 TCP10L2B9ZVM9 353 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 FOXN3O00409 490 aaPredicted RBP27.67■■■□□ 2.02
COL13A1-203ENST00000398969 EXOC3O60645 756 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 PPFIA2O75334 1257 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 PPP2R2AP63151 447 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 DR1Q01658 176 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 TXLNGYQ9BZA5 131 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 ERVK-5Q9HDB9 667 aa27.67■■■□□ 2.02
COL13A1-203ENST00000398969 NOVA2Q9UNW9 492 aaKnown RBP27.67■■■□□ 2.02
COL13A1-203ENST00000398969 CLRN2A0PK11 232 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 LRRN2O75325 713 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 PPP2R5EQ16537 467 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 CCDC174Q6PII3 467 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 HOOK2Q96ED9 719 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 FMO2Q99518 471 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ZNF577Q9BSK1 485 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 WDR11Q9BZH6 1224 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ZNF70Q9UC06 446 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-203ENST00000398969 GOLGA6L10A0A0M3HER8 536 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 FSBPO95073 299 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 RFX1P22670 979 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 GUCY2CP25092 1073 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 COPB2P35606 906 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ZNF211Q13398 564 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ODF2Q5BJF6 829 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 FBXW10Q5XX13 1052 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ADAT2Q7Z6V5 191 aaKnown RBP27.66■■■□□ 2.02
COL13A1-203ENST00000398969 SYCP3Q8IZU3 236 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 RDH13Q8NBN7 331 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ALG3Q92685 438 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 CYFIP2Q96F07 1278 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 AGPAT1Q99943 283 aa27.66■■■□□ 2.02
COL13A1-203ENST00000398969 CNOT8Q9UFF9 292 aaKnown RBP27.66■■■□□ 2.02
COL13A1-203ENST00000398969 ARP10275 920 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 FNTAP49354 379 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 MAPK7Q13164 816 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 DALRD3Q5D0E6 543 aaKnown RBP27.65■■■□□ 2.02
COL13A1-203ENST00000398969 DUPD1Q68J44 220 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 LXNQ9BS40 222 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 MTFR1LQ9H019 292 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 CAPN7Q9Y6W3 813 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 GMNCA6NCL1 334 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 TRAPPC3O43617 180 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 HIP1RO75146 1068 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 TMOD1P28289 359 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 PPARDQ03181 441 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 KRT71Q3SY84 523 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 SPDYCQ5MJ68 293 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 SUGP1Q8IWZ8 645 aaKnown RBP27.65■■■□□ 2.02
COL13A1-203ENST00000398969 AGBL3Q8NEM8 1001 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 ERP44Q9BS26 406 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 LRRC4CQ9HCJ2 640 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 ATP8A1Q9Y2Q0 1164 aa27.65■■■□□ 2.02
COL13A1-203ENST00000398969 DCDC2CA8MYV0 355 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 B3GNT9Q6UX72 402 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 CNPY4Q8N129 248 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 DAW1Q8N136 415 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms