RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 NR2E1Q9Y466 385 aa12.47□□□□□ -0.41
SRMP1-201ENST00000398959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.46□□□□□ -0.41
SRMP1-201ENST00000398959 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 EML1O00423 815 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 MARCH6O60337 910 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
SRMP1-201ENST00000398959 CXCL14O95715 111 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 QARSP47897 775 aaKnown RBP12.46□□□□□ -0.41
SRMP1-201ENST00000398959 POLGP54098 1239 aaPredicted RBP12.46□□□□□ -0.41
SRMP1-201ENST00000398959 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 PPP2R5CQ13362 524 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 FAM20AQ96MK3 541 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 TRAIPQ9BWF2 469 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 GBP3Q9H0R5 595 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 CYP26B1Q9NR63 512 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 HCFC2Q9Y5Z7 792 aa12.46□□□□□ -0.41
SRMP1-201ENST00000398959 PIEZO1Q92508 2521 aa12.46□□□□□ -0.42
SRMP1-201ENST00000398959 CLASP2O75122 1294 aaKnown RBP12.45□□□□□ -0.42
SRMP1-201ENST00000398959 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
SRMP1-201ENST00000398959 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
SRMP1-201ENST00000398959 NPEPPSP55786 919 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 ITIH3Q06033 890 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 SCRN1Q12765 414 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 GIT2Q14161 759 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 NOMO2Q5JPE7 1267 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 FBXL6Q8N531 539 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 URGCPQ8TCY9 931 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 NECTIN4Q96NY8 510 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 ZBP1Q9H171 429 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 IFT122Q9HBG6 1241 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 ZDBF2Q9HCK1 2354 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 TRIP11Q15643 1979 aa12.45□□□□□ -0.42
SRMP1-201ENST00000398959 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 SRGAP2CP0DJJ0 459 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 RFC5P40937 340 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 MTHFRP42898 656 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 RARS2Q5T160 578 aaKnown RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PIK3AP1Q6ZUJ8 805 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 OTUD6AQ7L8S5 288 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 TMEM173Q86WV6 379 aaPredicted RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PRPF31Q8WWY3 499 aaKnown RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PSPC1Q8WXF1 523 aaKnown RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 AUTS2Q8WXX7 1259 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 TMEM143Q96AN5 459 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 IGSF21Q96ID5 467 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 RIPOR3Q96MK2 946 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 FAM193BQ96PV7 902 aaPredicted RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 NAP1L4Q99733 375 aaKnown RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PRRX2Q99811 253 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 LXNQ9BS40 222 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 ADAM7Q9H2U9 754 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 NRDE2Q9H7Z3 1164 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
SRMP1-201ENST00000398959 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 PCDHB2Q9Y5E7 798 aa12.44□□□□□ -0.42
SRMP1-201ENST00000398959 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 TBX3O15119 743 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 ZNF623O75123 536 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 OFD1O75665 1012 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 BAG4O95429 457 aaKnown RBP12.43□□□□□ -0.42
SRMP1-201ENST00000398959 GALTP07902 379 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 CTSAP10619 480 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
SRMP1-201ENST00000398959 PTPN5P54829 565 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 EPHA7Q15375 998 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 IER5LQ5T953 404 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 NCAPH2Q6IBW4 605 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
SRMP1-201ENST00000398959 PRSS33Q8NF86 280 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 DHX33Q9H6R0 707 aaKnown RBP12.43□□□□□ -0.42
SRMP1-201ENST00000398959 RSAD1Q9HA92 442 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 WRAP73Q9P2S5 460 aaPredicted RBP12.43□□□□□ -0.42
SRMP1-201ENST00000398959 DNAJB4Q9UDY4 337 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 IRAK3Q9Y616 596 aa12.43□□□□□ -0.42
SRMP1-201ENST00000398959 CNTNAP2Q9UHC6 1331 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 C2CD4DB7Z1M9 353 aa12.42□□□□□ -0.42
SRMP1-201ENST00000398959 GAS2O43903 313 aaKnown RBP12.42□□□□□ -0.42
SRMP1-201ENST00000398959 PFKFB2O60825 505 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms